GapMind for catabolism of small carbon sources

 

Protein WP_013421170.1 in Rhodomicrobium vannielii ATCC 17100

Annotation: NCBI__GCF_000166055.1:WP_013421170.1

Length: 134 amino acids

Source: GCF_000166055.1 in NCBI

Candidate for 4 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism epi hi Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC 5.1.99.1 (characterized) 81% 99% 215.3
L-isoleucine catabolism epi hi mce: methylmalonyl-CoA epimerase (EC 5.1.99.1) (TIGR03081) 100% 171.7
propionate catabolism epi hi Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC 5.1.99.1 (characterized) 81% 99% 215.3
propionate catabolism epi hi mce: methylmalonyl-CoA epimerase (EC 5.1.99.1) (TIGR03081) 100% 171.7
L-threonine catabolism epi hi Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC 5.1.99.1 (characterized) 81% 99% 215.3
L-threonine catabolism epi hi mce: methylmalonyl-CoA epimerase (EC 5.1.99.1) (TIGR03081) 100% 171.7
L-valine catabolism epi hi Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC 5.1.99.1 (characterized) 81% 99% 215.3
L-valine catabolism epi hi mce: methylmalonyl-CoA epimerase (EC 5.1.99.1) (TIGR03081) 100% 171.7

Sequence Analysis Tools