Align Branched-chain-amino-acid aminotransferase 2; BCAT 2; Vegetative protein 85; VEG85; EC 2.6.1.42 (characterized)
to candidate 7026697 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq)
Query= SwissProt::P39576 (363 letters) >FitnessBrowser__ANA3:7026697 Length = 363 Score = 287 bits (734), Expect = 4e-82 Identities = 152/347 (43%), Positives = 218/347 (62%), Gaps = 6/347 (1%) Query: 13 TKKPKPDPNQLSFGRVFTDHMFVMDYAADKGWYDPRIIPYQPLSMDPAAMVYHYGQTVFE 72 T++ KP+ N + FG + TDHMF+MDY D W DPRI+PY P M P AM HYGQ++FE Sbjct: 15 TEQFKPEGN-VGFGSLRTDHMFLMDYR-DGEWRDPRIVPYGPFEMAPGAMALHYGQSIFE 72 Query: 73 GLKAYVSEDDHVLLFRPEKNMERLNQSNDRLCIPQIDEEQVLEGLKQLVAIDKDWIPNAE 132 G KA++ ED + FR KN ER+N+S D +CIP IDE+ ++ + L+ +D+ W P E Sbjct: 73 GAKAFMHEDGEIYTFRINKNAERMNRSADIVCIPNIDEQMQIDAINALIDVDRLWFPMQE 132 Query: 133 GTSLYIRPFIIATEPFLGVAASHTYKLLIILSPVGSYYKEGI-KPVKIAVESEFVRAVKG 191 G LYIRPFI ATE L V+ S Y ++LSP G+YY G+ K +++ + + RAV G Sbjct: 133 GACLYIRPFIFATEDRLSVSPSTRYTFCVVLSPSGAYYAAGVNKGIRLLISKTYHRAVSG 192 Query: 192 GTGNAKTAGNYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKI-NGEIVTP 250 GTG +K AGNYA+SL+A + A + G SQVL+LD + IEE G+MN F + +G ++ P Sbjct: 193 GTGASKAAGNYAASLRAGKAAAQFGASQVLYLDA-NNQQIEEAGAMNHFHILKDGTVIIP 251 Query: 251 MLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFGTGTAAVISPV 310 +IL+ IT S++ L + G +V + + +D+ I + G + EA G GTAAV+S V Sbjct: 252 TFTDTILKSITSQSIMELGELLGCEVRQETVMLDKFIADIESGEIIEAGGFGTAAVVSAV 311 Query: 311 GELIWQD-ETLSINNGETGEIAKKLYDTITGIQKGAVADEFGWTTEV 356 G I++D +++ NGE GE +++Y T IQKG + GW V Sbjct: 312 GSYIFEDGRVVTVGNGEVGEHIQRIYKLYTDIQKGHIQGPDGWVKRV 358 Lambda K H 0.316 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 361 Number of extensions: 16 Number of successful extensions: 4 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 363 Length of database: 363 Length adjustment: 29 Effective length of query: 334 Effective length of database: 334 Effective search space: 111556 Effective search space used: 111556 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 49 (23.5 bits)
Align candidate 7026697 Shewana3_3830 (branched-chain amino acid aminotransferase (RefSeq))
to HMM TIGR01123 (ilvE: branched-chain amino acid aminotransferase (EC 2.6.1.42))
../bin/blast/fastacmd -i /tmp/list.23113.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.23113.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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