Align glutamate 5-kinase (EC 2.7.2.11) (characterized)
to candidate 7023724 Shewana3_0954 gamma-glutamyl kinase (RefSeq)
Query= BRENDA::P0A7B5 (367 letters) >FitnessBrowser__ANA3:7023724 Length = 372 Score = 446 bits (1146), Expect = e-130 Identities = 230/360 (63%), Positives = 282/360 (78%), Gaps = 1/360 (0%) Query: 7 LVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELP 66 +VVKLGTSVLT GS++L++AH+VEL RQ A L +G +V+ TSGAIAAGREHL YPELP Sbjct: 11 VVVKLGTSVLTSGSKQLDKAHMVELARQMAALMRSGVEVVLCTSGAIAAGREHLQYPELP 70 Query: 67 ATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLD 126 T+A+KQLLAAVGQS+LI W QLFSIYG+HVGQ+LLTRAD+ DRER+LNARDTL ALL Sbjct: 71 DTMANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLA 130 Query: 127 NNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAE 186 NNI+P+INENDAVAT EIKVGDNDNLSA AA+L AD L+LLTDQKGL+ ADPR+NP A+ Sbjct: 131 NNIIPIINENDAVATNEIKVGDNDNLSARAALLCDADLLILLTDQKGLFDADPRTNPNAK 190 Query: 187 LIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVM 246 LI V IDD+LR +AG SVSGLGTGGMSTKL+AAD+A RAGI+ +IA+G P VI V+ Sbjct: 191 LISQVEKIDDSLRLLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASGHHPDVIKKVV 250 Query: 247 EGISVGTLFHAQATPLENRKRWIFGAPPA-GEITVDEGATAAILERGSSLLPKGIKSVTG 305 SVGT F A PLE+RK+WI P A G + +D GA A+ E+G SLL KGI V G Sbjct: 251 GKESVGTHFSAIENPLESRKQWILAGPAAQGSLVLDAGAVKAVTEKGRSLLSKGIIGVKG 310 Query: 306 NFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDDMI 365 F RG +++ + +G+ IA G++RY +AL IAG HS EI+++LGY+YG VHR+DM+ Sbjct: 311 EFERGATLQLVDQKGKIIARGITRYCGEALGLIAGKHSDEIESVLGYDYGDAIVHRNDMV 370 Lambda K H 0.318 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 409 Number of extensions: 10 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 367 Length of database: 372 Length adjustment: 30 Effective length of query: 337 Effective length of database: 342 Effective search space: 115254 Effective search space used: 115254 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate 7023724 Shewana3_0954 (gamma-glutamyl kinase (RefSeq))
to HMM TIGR01027 (proB: glutamate 5-kinase (EC 2.7.2.11))
../bin/blast/fastacmd -i /tmp/list.873.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.873.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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