Align Phenylalanine 4-monooxygenase (EC 1.14.16.1) (characterized)
to candidate 7025630 Shewana3_2781 phenylalanine 4-monooxygenase (RefSeq)
Query= reanno::MR1:200831 (271 letters) >FitnessBrowser__ANA3:7025630 Length = 271 Score = 530 bits (1366), Expect = e-155 Identities = 258/271 (95%), Positives = 262/271 (96%) Query: 1 MTIDTVHTAPYVARSADDSGYIHYPQEEHDIWRQLYARQAVNLPGRACKEYLQGLDALAM 60 MT + HTAPYVARSADDSGYIHYPQEEHDIW QLYARQAV LPGRACKEYLQGL ALAM Sbjct: 1 MTKEIAHTAPYVARSADDSGYIHYPQEEHDIWSQLYARQAVKLPGRACKEYLQGLAALAM 60 Query: 61 PKDRIPQLAEIDKVLMATTGWKTADVPALISFGRFFELLANKEFPVATFIRRKEEFDYLQ 120 PKDRIPQLAEIDKVL ATTGWKTA VPALISFGRFFELLANKEFPVATFIRRKEEFDYLQ Sbjct: 61 PKDRIPQLAEIDKVLQATTGWKTAAVPALISFGRFFELLANKEFPVATFIRRKEEFDYLQ 120 Query: 121 EPDIFHEIFGHCPLLTNPSFAHFSHMYGQLGLNASKEDRVFLARLYWFTVEFGLLKPQEG 180 EPDIFHEIFGHCPLLTNPSFAHFSH+YGQLGLNASKEDRVFLARLYWFTVEFGLLKPQ+G Sbjct: 121 EPDIFHEIFGHCPLLTNPSFAHFSHIYGQLGLNASKEDRVFLARLYWFTVEFGLLKPQDG 180 Query: 181 ELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHIDVLDE 240 ELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHID+LDE Sbjct: 181 ELCIYGGGILSSPGETLYAMESQVPERKPFDLLDVLRTPYRIDIMQPIYYVIEHIDMLDE 240 Query: 241 IAKMDIMAYVAKARQLGLFAPKYPPKAKKAS 271 IAKMDIMAYVAKARQLGLFAPKYPPK KKAS Sbjct: 241 IAKMDIMAYVAKARQLGLFAPKYPPKTKKAS 271 Lambda K H 0.323 0.140 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 386 Number of extensions: 9 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 271 Length of database: 271 Length adjustment: 25 Effective length of query: 246 Effective length of database: 246 Effective search space: 60516 Effective search space used: 60516 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 47 (22.7 bits)
Align candidate 7025630 Shewana3_2781 (phenylalanine 4-monooxygenase (RefSeq))
to HMM TIGR01267 (phhA: phenylalanine-4-hydroxylase (EC 1.14.16.1))
../bin/blast/fastacmd -i /tmp/list.1644.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.1644.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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