Align N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; EC 1.2.1.38; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase (uncharacterized)
to candidate H281DRAFT_05840 H281DRAFT_05840 N-acetyl-gamma-glutamyl-phosphate reductase
Query= curated2:Q8Y339 (337 letters) >FitnessBrowser__Burk376:H281DRAFT_05840 Length = 315 Score = 422 bits (1084), Expect = e-123 Identities = 209/313 (66%), Positives = 244/313 (77%) Query: 1 MAFKVFVDGQEGTTGLRLLDYLSQRDDIELLRIAEDRRKDPAERAKFLNAADVAFLCLPD 60 M+ KVFVDGQEGTTGL++ +YLSQR D+E+LRI E +RKD ER + +NA+DV FLCLPD Sbjct: 1 MSTKVFVDGQEGTTGLKIFEYLSQRADVEILRIDEAKRKDIEERRRLINASDVTFLCLPD 60 Query: 61 VASREAVSLVDNPNTCIIDASTAFRTSDDWAYGLPELAPGQRERLRNSKRIAVPGCHASA 120 VASRE+ SLV+N T +IDASTAFRTS DWAYGLPELA QRERLR +KRIAVPGCHASA Sbjct: 61 VASRESASLVENERTVLIDASTAFRTSADWAYGLPELARSQRERLRTAKRIAVPGCHASA 120 Query: 121 FVLLMRPLVEAGIVPADYPITAFSLTGYSGGGKKMIADYLAADNPKLQSPRPYALALTHK 180 FVL MRPLV+AG+V D+ A+S+TGYSGGGKKMIADY A N KL+SPRPYAL LTHK Sbjct: 121 FVLAMRPLVDAGVVAPDFDAHAYSITGYSGGGKKMIADYEAGGNAKLKSPRPYALGLTHK 180 Query: 181 HLPEMRVQSKLALPPIFTPVVGNFLKGLAVTIGLHPQHLASKVSPADIAKVFADYYQGEQ 240 HLPEM + L PIFTP+VG+F KGLAVT P+ LA K +P + A+YY GE Sbjct: 181 HLPEMAAHTGLTSAPIFTPIVGDFYKGLAVTTYFSPRQLARKTTPQQVQAHLAEYYAGEA 240 Query: 241 FIRVAPADNVETLDNGFFDVQGANDTNRADLFVFGSDERMVVTARLDNLGKGAAGAAVQC 300 F+RVAP D LD+GFFDVQ NDTNR DLFVFG+ ER V ARLDNLGKGA+GAA+QC Sbjct: 241 FVRVAPFDAEANLDSGFFDVQANNDTNRVDLFVFGTAERFVTVARLDNLGKGASGAAIQC 300 Query: 301 MNVHLGVDEATSL 313 MN+ +G E + L Sbjct: 301 MNLAIGAAEESGL 313 Lambda K H 0.320 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 351 Number of extensions: 13 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 337 Length of database: 315 Length adjustment: 28 Effective length of query: 309 Effective length of database: 287 Effective search space: 88683 Effective search space used: 88683 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 48 (23.1 bits)
Align candidate H281DRAFT_05840 H281DRAFT_05840 (N-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01851 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.12932.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.12932.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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