Align Histidinol-phosphate aminotransferase 2; EC 2.6.1.9; Imidazole acetol-phosphate transaminase 2 (uncharacterized)
to candidate H281DRAFT_05654 H281DRAFT_05654 histidinol phosphate aminotransferase apoenzyme
Query= curated2:Q46WL3 (366 letters) >FitnessBrowser__Burk376:H281DRAFT_05654 Length = 356 Score = 461 bits (1185), Expect = e-134 Identities = 236/348 (67%), Positives = 275/348 (79%), Gaps = 4/348 (1%) Query: 12 IIRDDVRAMGAYHVPDSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEAL 71 IIR DV AM +Y V D+ G +KLDAMENP+ LPP L + L L VALNRYP P EAL Sbjct: 7 IIRRDVLAMTSYPVADATGYIKLDAMENPFPLPPVLAAHLGEHLAGVALNRYPAPRPEAL 66 Query: 72 RAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLE 131 K+K VM VPAG +VLLGNGSDEIISM+++A A+PGAKV+APVPGFVMY MSA+ A LE Sbjct: 67 IEKIKRVMGVPAGCDVLLGNGSDEIISMVSIACAKPGAKVLAPVPGFVMYQMSAKLANLE 126 Query: 132 FVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCR 191 F+GVPL ADFTLD AMLAA+AEH+PA+VYLAYPNNPTG LFD ADME I+ AA + Sbjct: 127 FIGVPLNADFTLDTEAMLAAIAEHEPAVVYLAYPNNPTGTLFDDADMERIIAAA----TK 182 Query: 192 SLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKVR 251 SLVV+DEAYQPFAQ SW+ R F N++VMRTVSKLGLAGIRLGY+ G P WL +LDKVR Sbjct: 183 SLVVIDEAYQPFAQRSWLPRADAFDNVVVMRTVSKLGLAGIRLGYLVGKPAWLTELDKVR 242 Query: 252 PPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLAR 311 PPYN NVLT+A A F L+HV VLD QAAQLR ER+++A+ +A G VFPSA NFLL R Sbjct: 243 PPYNTNVLTQAAADFLLDHVDVLDSQAAQLRDERTKLAQAVAELPGAEVFPSAGNFLLVR 302 Query: 312 VPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEA 359 VPDA+ F+ LLA +VLIKNVSKMH LLANC+R+TV +PEENAQ + A Sbjct: 303 VPDASVLFETLLAARVLIKNVSKMHALLANCVRLTVGSPEENAQLIAA 350 Lambda K H 0.321 0.134 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 426 Number of extensions: 13 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 366 Length of database: 356 Length adjustment: 29 Effective length of query: 337 Effective length of database: 327 Effective search space: 110199 Effective search space used: 110199 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 49 (23.5 bits)
Align candidate H281DRAFT_05654 H281DRAFT_05654 (histidinol phosphate aminotransferase apoenzyme)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.16739.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.16739.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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