Align glutamate 5-kinase (EC 2.7.2.11) (characterized)
to candidate H281DRAFT_06264 H281DRAFT_06264 glutamate 5-kinase
Query= BRENDA::P0A7B5 (367 letters) >FitnessBrowser__Burk376:H281DRAFT_06264 Length = 372 Score = 290 bits (741), Expect = 6e-83 Identities = 160/366 (43%), Positives = 224/366 (61%), Gaps = 1/366 (0%) Query: 1 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHL 60 ++DS+ LVVK+G+S++T R L+ A I Q A L A +V+V+SGAIA G + L Sbjct: 5 IADSRRLVVKVGSSLVTNDGRGLDHAAIGRWAAQIAALRAQSKEVVLVSSGAIAEGMQRL 64 Query: 61 GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT 120 G+ + P I Q AAVGQ L Q++E F+ + I Q+LLT AD+ DRER+LNAR T Sbjct: 65 GWSKRPREIDELQAAAAVGQMGLAQVYESRFAEHSIQTAQILLTHADLADRERYLNARST 124 Query: 121 LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPR 180 L LL +VP+INEND V T EIK GDND L AL A L D L++LTDQ+GL+TADPR Sbjct: 125 LLTLLRLGVVPIINENDTVVTDEIKFGDNDTLGALVANLIEGDALIILTDQQGLFTADPR 184 Query: 181 SNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPG 240 +P A L++ L A+AG + S LG GGM TK+ AA A +G +T+IA+G + Sbjct: 185 KDPNATLVQQADAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGREAD 244 Query: 241 VIGDVMEGISVGTLFHAQATPLENRKRWIFG-APPAGEITVDEGATAAILERGSSLLPKG 299 V+ + G ++GT A+ + RK+W+ G + +D+GA + G SLLP G Sbjct: 245 VLSRLASGEAIGTQLIARTARMAARKQWMADHLQVRGHVVIDDGAVEKLTAGGKSLLPIG 304 Query: 300 IKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAV 359 I V G F+RGEVI N GR++A G++ Y+S + I S EI+++LGY P + Sbjct: 305 IVGVQGAFARGEVIACLNAAGREVARGLTNYSSAETKLIQRRPSGEIESVLGYMLEPELI 364 Query: 360 HRDDMI 365 HRD+++ Sbjct: 365 HRDNLV 370 Lambda K H 0.318 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 363 Number of extensions: 8 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 367 Length of database: 372 Length adjustment: 30 Effective length of query: 337 Effective length of database: 342 Effective search space: 115254 Effective search space used: 115254 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate H281DRAFT_06264 H281DRAFT_06264 (glutamate 5-kinase)
to HMM TIGR01027 (proB: glutamate 5-kinase (EC 2.7.2.11))
../bin/blast/fastacmd -i /tmp/list.10941.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.10941.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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