Align 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) (characterized)
to candidate CCNA_00515 CCNA_00515 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
Query= BRENDA::P25665 (753 letters) >FitnessBrowser__Caulo:CCNA_00515 Length = 777 Score = 814 bits (2102), Expect = 0.0 Identities = 423/775 (54%), Positives = 531/775 (68%), Gaps = 24/775 (3%) Query: 1 MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLP 60 MT+ TLGFPR+G +RELK A E+YWAG + + LL R+LRA+ W +Q G+ +P Sbjct: 1 MTVTIATLGFPRIGPKRELKFALEAYWAGKTDADALLDTARDLRAKTWTRQAALGVAHVP 60 Query: 61 VGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRG---------------RAP 105 DF+ YDHVL T++++G +PA + G+VD+ T F + RG AP Sbjct: 61 SNDFSLYDHVLDTAVMVGAIPAAYGWSGGTVDLATYFAMARGDQGRPAAEACGPGCGHAP 120 Query: 106 TGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLDEVDEALALGHKVKPVLLGPV 165 + A EMTKWF+TNYHY+ PE GQ F LT ++ +DE EA ALG +PVLLGPV Sbjct: 121 GADGVPALEMTKWFDTNYHYLAPELSPGQAFALTSSKPVDEFLEAKALGVHTRPVLLGPV 180 Query: 166 TWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAY 225 T+L L K K E F LSLL+ +LPVY QVL LA G +WVQIDEP L L+L Sbjct: 181 TFLKLAKTKAEGFSPLSLLSALLPVYGQVLRGLAAAGADWVQIDEPCLALDLTDFERAEL 240 Query: 226 KPAYDALQGQ---VKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPS 282 + AY AL V+L+LT+YF G NL T LPV+GLH+DLV D++ Sbjct: 241 RRAYGALTHAAPGVRLMLTSYFGGYGENLATAVNLPVEGLHLDLVRAPDELEAALAASRE 300 Query: 283 DWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRD---LWVASSCSLLHSPIDLSVETRLD 339 +LS G+I+GRNVWRADL +++ +V +R + +A SCSLLH+PIDL +ET LD Sbjct: 301 SLVLSLGVIDGRNVWRADLPALLDRLEPVVARRGSDRVVLAPSCSLLHTPIDLDLETALD 360 Query: 340 AEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRH---STRVHNPAVEKRL 396 E++ W AFA+QK LA+L ALN G + A A QA R S R+H+P V +RL Sbjct: 361 PEIRQWLAFAVQKVEALAVLAQALNGGRASVAAALEASAQAARARATSPRIHDPKVAERL 420 Query: 397 AAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANN 456 AA+T ++R + Y+ R EAQRAR LP PTTTIGSFPQTTE+R R F KG + Sbjct: 421 AAVTPDMTRRRSPYDQRREAQRARLNLPPLPTTTIGSFPQTTEVRQARAAFAKGQISDAT 480 Query: 457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRC 516 Y + + +A+ QE +GLDVLVHGE ERNDMV+YFGE L GF FTQ+GWVQSYGSRC Sbjct: 481 YEAFLRQETARAVAWQETVGLDVLVHGEFERNDMVQYFGEQLAGFAFTQSGWVQSYGSRC 540 Query: 517 VKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQ 576 V+PPI+ GD+SRPAP+TV+W +YAQ LT +P+KGMLTGPVTIL WSF R+D+ RET +Q Sbjct: 541 VRPPILFGDVSRPAPMTVDWWRYAQGLTRRPMKGMLTGPVTILNWSFVRDDLPRETACRQ 600 Query: 577 IALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDT 636 IALA+RDEV DLEA G IIQIDE ALREGLPLRR DWDAYL W VE+FR+ A+ D T Sbjct: 601 IALAIRDEVVDLEATGAAIIQIDEAALREGLPLRRGDWDAYLDWAVESFRLAASGVADAT 660 Query: 637 QIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSP 696 QIHTHMCY EFNDI+ +I A+DADVI+IET+RS MELL++F + YP +IGPGVYDIHSP Sbjct: 661 QIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAFVGYAYPAQIGPGVYDIHSP 720 Query: 697 NVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751 VP+VE + LL A +R+ E+LWVNPDCGLKTR WPET+AA+ NMV+AA+ R Sbjct: 721 RVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNMVEAARRAR 775 Lambda K H 0.319 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 1607 Number of extensions: 82 Number of successful extensions: 7 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 753 Length of database: 777 Length adjustment: 40 Effective length of query: 713 Effective length of database: 737 Effective search space: 525481 Effective search space used: 525481 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 55 (25.8 bits)
Align candidate CCNA_00515 CCNA_00515 (5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase)
to HMM TIGR01371 (metE: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC 2.1.1.14))
../bin/blast/fastacmd -i /tmp/list.3061.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.3061.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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