Align N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; EC 1.2.1.38; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase (uncharacterized)
to candidate RR42_RS01210 RR42_RS01210 n-acetyl-gamma-glutamyl-phosphate reductase
Query= curated2:Q8Y339 (337 letters) >FitnessBrowser__Cup4G11:RR42_RS01210 Length = 315 Score = 486 bits (1251), Expect = e-142 Identities = 234/313 (74%), Positives = 271/313 (86%) Query: 1 MAFKVFVDGQEGTTGLRLLDYLSQRDDIELLRIAEDRRKDPAERAKFLNAADVAFLCLPD 60 M FKVFVDGQEGTTGLRLLDYLS R D+ELLRIA+D+RKDPAERA+FLNAADVAFLCLPD Sbjct: 1 MVFKVFVDGQEGTTGLRLLDYLSGRSDVELLRIADDKRKDPAERARFLNAADVAFLCLPD 60 Query: 61 VASREAVSLVDNPNTCIIDASTAFRTSDDWAYGLPELAPGQRERLRNSKRIAVPGCHASA 120 VASREAV+LV NP+TC+IDASTAFRT+D WAYGLPEL GQRE++R SKRIAVPGCHASA Sbjct: 61 VASREAVALVTNPDTCVIDASTAFRTTDSWAYGLPELTRGQREKIRTSKRIAVPGCHASA 120 Query: 121 FVLLMRPLVEAGIVPADYPITAFSLTGYSGGGKKMIADYLAADNPKLQSPRPYALALTHK 180 F++ +RPLVEAG++ ADYP++AFSLTGYSGGGK+MIA++ A NPKL SPRPY+L L HK Sbjct: 121 FLMAVRPLVEAGVMQADYPVSAFSLTGYSGGGKQMIAEFEAGGNPKLDSPRPYSLGLAHK 180 Query: 181 HLPEMRVQSKLALPPIFTPVVGNFLKGLAVTIGLHPQHLASKVSPADIAKVFADYYQGEQ 240 HLPEMRVQ+ LA PIF P+VGNFLKGLAVT+ ++P LA KV+P IA ++ +Y+GEQ Sbjct: 181 HLPEMRVQAGLAQAPIFNPIVGNFLKGLAVTVPVYPDRLARKVTPEQIADLYRKHYEGEQ 240 Query: 241 FIRVAPADNVETLDNGFFDVQGANDTNRADLFVFGSDERMVVTARLDNLGKGAAGAAVQC 300 F+RV P + LD GFFDVQ +NDTNR DLFVFGS ER+V+ ARLDNLGKGAAGAAVQC Sbjct: 241 FVRVMPVGDEANLDGGFFDVQASNDTNRVDLFVFGSAERIVLMARLDNLGKGAAGAAVQC 300 Query: 301 MNVHLGVDEATSL 313 MNVH+G DEAT L Sbjct: 301 MNVHVGADEATGL 313 Lambda K H 0.320 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 402 Number of extensions: 11 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 337 Length of database: 315 Length adjustment: 28 Effective length of query: 309 Effective length of database: 287 Effective search space: 88683 Effective search space used: 88683 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 48 (23.1 bits)
Align candidate RR42_RS01210 RR42_RS01210 (n-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01851 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.22360.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.22360.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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