Align acetylglutamate kinase (EC 2.7.2.8) (characterized)
to candidate N515DRAFT_3768 N515DRAFT_3768 N-acetylglutamate kinase
Query= BRENDA::A0A0H2X8L7 (447 letters) >FitnessBrowser__Dyella79:N515DRAFT_3768 Length = 438 Score = 686 bits (1770), Expect = 0.0 Identities = 347/441 (78%), Positives = 382/441 (86%), Gaps = 5/441 (1%) Query: 6 QPHKQTRQTIVRLLSSMASAKEISQYLKRFSQLDAKRFAVVKVGGAVLRDDLEALTSSLS 65 + HK TR+TIVRLLSSM SAKEI QYLKRFSQLDAKRFAVVKVGGAVLRDDL ALTSSL+ Sbjct: 2 EAHKHTRKTIVRLLSSMGSAKEIQQYLKRFSQLDAKRFAVVKVGGAVLRDDLPALTSSLT 61 Query: 66 FLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNLKLVE 125 FLQ+VGLTPIVLHGAGPQLD ELSAAGI+KQTVNGLRVTSP ALAIVRKVFQ NL+LVE Sbjct: 62 FLQQVGLTPIVLHGAGPQLDEELSAAGIQKQTVNGLRVTSPKALAIVRKVFQEQNLRLVE 121 Query: 126 ALQQNGARATSITGGVFEAEYLNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETP 185 ALQ RATS+ GVF +EYL+RD YGLVG+V ++NLAPIEASL+AGSIPVI SLGET Sbjct: 122 ALQGMDTRATSVPSGVFTSEYLDRDVYGLVGKVSSINLAPIEASLRAGSIPVIASLGETA 181 Query: 186 SGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLMQQPWI 245 GQILN+NADFAANELV+ LQPYKI+FLTGTGGLLD +G++IDSINLSTEY+HLM QPWI Sbjct: 182 EGQILNINADFAANELVRVLQPYKIVFLTGTGGLLDDKGRIIDSINLSTEYEHLMAQPWI 241 Query: 246 NGGMRVKIEQIKDLLDRLPLESSVSITRPADLAKELFTHKGSGTLVRRGERVLRATSWDE 305 NGGMRVKIEQI DLL LPL SSVSIT+P++LAKELFTHKGSGTLVRRGE+VLR SW+ Sbjct: 242 NGGMRVKIEQIADLLSSLPLTSSVSITQPSELAKELFTHKGSGTLVRRGEKVLRYESWEG 301 Query: 306 LDLPRLTSLIESSFGRTLVPDYFSNTKLLRAYVSENYRAAVILTDEGMLGASALIYLDKF 365 +DL R+ LIESSFGR +V DYF T+ R YVSENYRAA+ILT E L YLDKF Sbjct: 302 IDLARMRELIESSFGRKVVADYFERTRPYRIYVSENYRAAMILTQE-----EGLAYLDKF 356 Query: 366 AVLDDAQGEGLGRAVWNVMREETPQLFWRSRHNNQVNIFYYAESDGCIKQEKWKVFWYGL 425 AVLDDAQGEGLGRAVW VMREE PQLFWRSRH NQVNIFYYAESDGC KQE+WKVFWYGL Sbjct: 357 AVLDDAQGEGLGRAVWQVMREENPQLFWRSRHGNQVNIFYYAESDGCFKQERWKVFWYGL 416 Query: 426 ENFEQIQHCVAHCATRQPTLL 446 +NF +I+ CVAHCA R TL+ Sbjct: 417 KNFGEIERCVAHCAVRPATLM 437 Lambda K H 0.318 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 655 Number of extensions: 14 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 447 Length of database: 438 Length adjustment: 32 Effective length of query: 415 Effective length of database: 406 Effective search space: 168490 Effective search space used: 168490 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 51 (24.3 bits)
Align candidate N515DRAFT_3768 N515DRAFT_3768 (N-acetylglutamate kinase)
to HMM TIGR00761 (argB: acetylglutamate kinase (EC 2.7.2.8))
../bin/blast/fastacmd -i /tmp/list.7527.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.7527.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.