Align putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) (characterized)
to candidate N515DRAFT_2931 N515DRAFT_2931 phosphoribosyl-ATP pyrophosphatase /phosphoribosyl-AMP cyclohydrolase
Query= ecocyc::HISTCYCLOPRATPPHOS (203 letters) >FitnessBrowser__Dyella79:N515DRAFT_2931 Length = 209 Score = 219 bits (558), Expect = 3e-62 Identities = 115/197 (58%), Positives = 140/197 (71%), Gaps = 3/197 (1%) Query: 10 LDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETSG 69 LDW K DGL+P IVQH ++GEVLMLGYMN EAL +L S +VTFFSR+KQRLWTKGE+SG Sbjct: 11 LDWSKGDGLLPAIVQHWLTGEVLMLGYMNAEALAHSLSSAQVTFFSRSKQRLWTKGESSG 70 Query: 70 NFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFG---DTAHQWLFLYQLEQLLAERK 126 + L + S DCD DTLL+ A P GPTCH GTSSCFG D A FL L++L+ +R Sbjct: 71 HVLALKSARIDCDGDTLLLQAEPQGPTCHLGTSSCFGERADVAPPLGFLATLDRLVEQRA 130 Query: 127 SADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQD 186 + P SYT +L+ G +RIAQKVGEEGVETALAA V D L EA+DL++HL+V L+ Sbjct: 131 AERPAGSYTTRLFEDGIRRIAQKVGEEGVETALAAVVQDDEALLGEAADLVFHLMVALRA 190 Query: 187 QGLDLTTVIENLRKRHQ 203 +GL + V L RHQ Sbjct: 191 RGLSTSDVCRVLEARHQ 207 Lambda K H 0.317 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 144 Number of extensions: 3 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 203 Length of database: 209 Length adjustment: 21 Effective length of query: 182 Effective length of database: 188 Effective search space: 34216 Effective search space used: 34216 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 45 (21.9 bits)
Align candidate N515DRAFT_2931 N515DRAFT_2931 (phosphoribosyl-ATP pyrophosphatase /phosphoribosyl-AMP cyclohydrolase)
to HMM PF01502 (PRA-CH)
../bin/blast/fastacmd -i /tmp/list.11936.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.11936.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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