Align Phosphoserine aminotransferase 1, chloroplastic; AtPSAT1; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 (characterized)
to candidate N515DRAFT_1430 N515DRAFT_1430 phosphoserine aminotransferase apoenzyme
Query= SwissProt::Q96255 (430 letters) >FitnessBrowser__Dyella79:N515DRAFT_1430 Length = 361 Score = 380 bits (976), Expect = e-110 Identities = 184/358 (51%), Positives = 254/358 (70%) Query: 72 RVFNFAAGPATLPENVLLKAQADLYNWRGSGMSVMEMSHRGKEFLSIIQKAESDLRQLLE 131 RV+NF+AGPA +P VL +AQ +L +W GSG SVME+SHRGK F+ + ++AE+DLR+LL+ Sbjct: 3 RVWNFSAGPAAIPTAVLERAQRELLDWNGSGASVMELSHRGKRFIGLAEQAEADLRELLK 62 Query: 132 IPQEYSVLFLQGGATTQFAALPLNLCKSDDTVDFVVTGSWGDKAVKEAKKYCKTNVIWSG 191 IP +Y+VLFLQGGAT FA +PLNL D+ D++V G WG+KA EA Y + NV S Sbjct: 63 IPADYAVLFLQGGATQHFAQIPLNLAGEGDSADYIVNGHWGEKAASEAASYVRVNVAASS 122 Query: 192 KSEKYTKVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKNGFLVADMSSNFCSKPV 251 ++E+Y ++P + P A Y+H NETIHGVE+ D P LVADMSSN ++P+ Sbjct: 123 RNEQYLRLPPRASWQLDPRAAYVHYTPNETIHGVEYHDVPEVGEVPLVADMSSNILAEPL 182 Query: 252 DVSKFGVIYGGAQKNVGPSGVTIVIIRKDLIGNAQDITPVMLDYKIHDENSSLYNTPPCF 311 DVS+FG+IY GAQKN+GPSG+ ++IIR+DL+ A + Y H N S+ NTP + Sbjct: 183 DVSRFGLIYAGAQKNIGPSGLVVMIIRRDLLQRAARPMAKIFRYAEHAANDSMLNTPNTW 242 Query: 312 GIYMCGLVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGFFRCPVEKSVRSLMNVPFT 371 G Y+ GL F+ L EQGGL+ + +N+ KA LLY AI+ S G++R P++ + RS MNVPFT Sbjct: 243 GWYLAGLTFQWLKEQGGLEAMAHRNRDKAGLLYQAIDGSGGYYRNPIDPAARSRMNVPFT 302 Query: 372 LEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429 L S L+A+F+KE+ ++ LKGH+++GGMRAS+YNA+PL V+ LV FM+DF A+H Sbjct: 303 LHDSALDADFLKESEAAGLLALKGHKALGGMRASLYNAVPLEAVQVLVQFMRDFAARH 360 Lambda K H 0.316 0.132 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 362 Number of extensions: 10 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 430 Length of database: 361 Length adjustment: 31 Effective length of query: 399 Effective length of database: 330 Effective search space: 131670 Effective search space used: 131670 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 50 (23.9 bits)
Align candidate N515DRAFT_1430 N515DRAFT_1430 (phosphoserine aminotransferase apoenzyme)
to HMM TIGR01364 (serC: phosphoserine transaminase (EC 2.6.1.52))
../bin/blast/fastacmd -i /tmp/list.23703.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.23703.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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