Align glutamate 5-kinase (EC 2.7.2.11) (characterized)
to candidate N515DRAFT_3772 N515DRAFT_3772 glutamate 5-kinase
Query= BRENDA::P0A7B5 (367 letters) >FitnessBrowser__Dyella79:N515DRAFT_3772 Length = 380 Score = 274 bits (701), Expect = 3e-78 Identities = 157/360 (43%), Positives = 220/360 (61%), Gaps = 5/360 (1%) Query: 8 VVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPA 67 V+K+G+++L L H L HA G ++V+V+SGA+AAGR L LP Sbjct: 17 VLKVGSNLLAADGGGLTPRHARALAAFIGDSHAQGRQVVLVSSGAVAAGRALLRERALPG 76 Query: 68 T-IASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLD 126 +A++Q LAA+GQ+ +I LW+ S+ V Q+LLT D+ R R+LNAR TLR LL Sbjct: 77 DDLAARQALAALGQAPMIALWQ---SLSPRPVAQVLLTHDDLRHRRRYLNARATLRELLL 133 Query: 127 NNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAE 186 +++PV+NEND VA E+K+GDNDNL+A+ A L AD LL+ +D LY ADPR P A Sbjct: 134 LDVLPVVNENDTVAVDELKLGDNDNLAAIVAALVDADLLLIASDIDALYDADPRRVPSAV 193 Query: 187 LIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVM 246 + V + + A+AG S S +GTGGM TKL+AA A AG+ T++ G + + Sbjct: 194 PVPHVSTLTAEVMAMAGGSGSAVGTGGMHTKLEAAVKAGAAGVPTVLFDGRNTETVAALA 253 Query: 247 EGISVGTLFHAQATPLENRKRWIFGAPPA-GEITVDEGATAAILERGSSLLPKGIKSVTG 305 G GTLF A + ++ RK W+ AP A G I VD+GA A+ +SLLP GI G Sbjct: 254 AGQLHGTLFDAPRSRMQARKYWLRHAPAAPGSILVDDGAARALAGGRASLLPGGIVGADG 313 Query: 306 NFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDDMI 365 F RG+++ I ++ R +A G+S+Y + +RR+AG HS IDA+LGY YG VHRDD++ Sbjct: 314 EFHRGDMVEIVDVTRRPVARGLSQYGAAEVRRLAGRHSSAIDAVLGYSYGAEIVHRDDLV 373 Lambda K H 0.318 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 407 Number of extensions: 20 Number of successful extensions: 4 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 367 Length of database: 380 Length adjustment: 30 Effective length of query: 337 Effective length of database: 350 Effective search space: 117950 Effective search space used: 117950 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.9 bits)
Align candidate N515DRAFT_3772 N515DRAFT_3772 (glutamate 5-kinase)
to HMM TIGR01027 (proB: glutamate 5-kinase (EC 2.7.2.11))
../bin/blast/fastacmd -i /tmp/list.16300.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.16300.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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