Align acetylglutamate kinase; EC 2.7.2.8 (characterized)
to candidate BWI76_RS00850 BWI76_RS00850 acetylglutamate kinase
Query= CharProtDB::CH_001694 (258 letters) >FitnessBrowser__Koxy:BWI76_RS00850 Length = 257 Score = 470 bits (1209), Expect = e-137 Identities = 241/257 (93%), Positives = 248/257 (96%) Query: 2 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKK 61 MNPLIIKLGGVLLDSEEALERLF+ALVNYRESHQRPL+IVHGGGCVVDELMK LNLPV K Sbjct: 1 MNPLIIKLGGVLLDSEEALERLFTALVNYRESHQRPLIIVHGGGCVVDELMKQLNLPVNK 60 Query: 62 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGH 121 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKH +AAVGLFLGDGDSVKVTQLDEELGH Sbjct: 61 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHGLAAVGLFLGDGDSVKVTQLDEELGH 120 Query: 122 VGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSD 181 VG AQPGSP LIN+LL GY+PVVSSIGVTDEG+LMNVNADQAATALAATLGADLILLSD Sbjct: 121 VGFAQPGSPALINTLLAGGYMPVVSSIGVTDEGELMNVNADQAATALAATLGADLILLSD 180 Query: 182 VSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAE 241 VSGILDGKGQRIAEMTA KAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAE Sbjct: 181 VSGILDGKGQRIAEMTAEKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAE 240 Query: 242 QLPALFNGMPMGTRILA 258 QLPALFNG P+GTRILA Sbjct: 241 QLPALFNGTPIGTRILA 257 Lambda K H 0.317 0.136 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 355 Number of extensions: 5 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 258 Length of database: 257 Length adjustment: 24 Effective length of query: 234 Effective length of database: 233 Effective search space: 54522 Effective search space used: 54522 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 47 (22.7 bits)
Align candidate BWI76_RS00850 BWI76_RS00850 (acetylglutamate kinase)
to HMM TIGR00761 (argB: acetylglutamate kinase (EC 2.7.2.8))
../bin/blast/fastacmd -i /tmp/list.18062.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.18062.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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