Align glutamate 5-kinase (EC 2.7.2.11) (characterized)
to candidate BWI76_RS05840 BWI76_RS05840 glutamate 5-kinase
Query= BRENDA::P0A7B5 (367 letters) >FitnessBrowser__Koxy:BWI76_RS05840 Length = 367 Score = 680 bits (1754), Expect = 0.0 Identities = 348/367 (94%), Positives = 358/367 (97%) Query: 1 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHL 60 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHA GHRIVIVTSGAIAAGREHL Sbjct: 1 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAMGHRIVIVTSGAIAAGREHL 60 Query: 61 GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT 120 GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT Sbjct: 61 GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT 120 Query: 121 LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPR 180 LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQ+GL+TADPR Sbjct: 121 LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLFTADPR 180 Query: 181 SNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPG 240 +NPQAELIKDVYGIDDALRAIAGDSVSGLGTGGM TKLQAADVACRAGIDTIIAAGS+PG Sbjct: 181 NNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGSRPG 240 Query: 241 VIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGI 300 VIGDVMEG+SVGT FHAQ +PLENRKRWIFGAPPAGEITVD GAT AILERGSSLLPKGI Sbjct: 241 VIGDVMEGVSVGTRFHAQESPLENRKRWIFGAPPAGEITVDAGATQAILERGSSLLPKGI 300 Query: 301 KSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVH 360 K++TGNFSRGEVIRI +LEGRDIAHGVSRYNSDALRRIAG HSQ+IDAILGYEYGPVAVH Sbjct: 301 KTITGNFSRGEVIRIRSLEGRDIAHGVSRYNSDALRRIAGQHSQQIDAILGYEYGPVAVH 360 Query: 361 RDDMITR 367 RDDMI R Sbjct: 361 RDDMIIR 367 Lambda K H 0.318 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 587 Number of extensions: 13 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 367 Length of database: 367 Length adjustment: 30 Effective length of query: 337 Effective length of database: 337 Effective search space: 113569 Effective search space used: 113569 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate BWI76_RS05840 BWI76_RS05840 (glutamate 5-kinase)
to HMM TIGR01027 (proB: glutamate 5-kinase (EC 2.7.2.11))
../bin/blast/fastacmd -i /tmp/list.18011.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.18011.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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