Align Ketol-acid reductoisomerase (NAD(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.382 (characterized)
to candidate 8499378 DvMF_0155 ketol-acid reductoisomerase (RefSeq)
Query= SwissProt::K4LVZ1 (332 letters) >FitnessBrowser__Miya:8499378 Length = 330 Score = 463 bits (1192), Expect = e-135 Identities = 222/330 (67%), Positives = 269/330 (81%) Query: 1 MKIYYDQDADLQYLDGKTVAVIGYGSQGHAQSQNLRDSGVKVVVADIPSSENWKKAEEAQ 60 MK+YY+QDA L+ L KTVA+IGYGSQGHA +QNLRDSG+ VVV P N++ A+E Sbjct: 1 MKVYYEQDATLEVLKDKTVAIIGYGSQGHAHAQNLRDSGINVVVGQRPGGANYELAKEHG 60 Query: 61 FQPLTADEAAREADIIQILVPDEKQAALYRESIAPNLRPGKALVFSHGFNIHFKQIVPPP 120 F PL EAA +AD+I IL+PD+ QAA+Y I PNL+PG AL+F+HGFNIHF QI PP Sbjct: 61 FAPLPVAEAAAKADLIMILLPDQVQAAIYEAEIKPNLKPGDALLFAHGFNIHFGQIEPPK 120 Query: 121 DVDVFMVAPKGPGHLVRRMYEEGAGVPSLVAVEQDYSGQALNLALAYAKGIGATRAGVIQ 180 DVDVFM+APKGPGHLVRR Y EG GVP LVA+ QD +G+A+ ALAYAKG+G R+GVI+ Sbjct: 121 DVDVFMIAPKGPGHLVRRTYTEGGGVPCLVAIHQDATGKAMEKALAYAKGVGGARSGVIE 180 Query: 181 TTFKEETETDLFGEQAVLCGGITELIRAGFDTLVDAGYQPEIAYFECLHEMKLIVDLIYE 240 TTFKEETETDLFGEQAVLCGG++ LI+AGF+TLV+AGYQPEIAYFECLHE+KLIVDLIYE Sbjct: 181 TTFKEETETDLFGEQAVLCGGLSSLIKAGFETLVEAGYQPEIAYFECLHEVKLIVDLIYE 240 Query: 241 GGISTMRYSISDTAEYGDLTRGKRIITEATREEMKKILKEIQDGVFAREWLLENQVGRPV 300 GG++ MR+SISDTAEYGD G+RI+ E T++EMKK+L+EIQ+G FAR ++LE + G P Sbjct: 241 GGLAKMRHSISDTAEYGDYVTGRRIVNEETKKEMKKVLQEIQEGTFARNFILEAKAGYPG 300 Query: 301 YNALRRKEQNHLIETVGARLRGMMPWLKKK 330 + A RR E +H IE VG +LRGMMPWL KK Sbjct: 301 FKATRRIEADHQIEQVGGKLRGMMPWLHKK 330 Lambda K H 0.318 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 378 Number of extensions: 12 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 332 Length of database: 330 Length adjustment: 28 Effective length of query: 304 Effective length of database: 302 Effective search space: 91808 Effective search space used: 91808 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate 8499378 DvMF_0155 (ketol-acid reductoisomerase (RefSeq))
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.32714.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.32714.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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