Align amino-acid N-acetyltransferase (EC 2.3.1.1) (characterized)
to candidate Dsui_1570 Dsui_1570 amino-acid N-acetyltransferase
Query= BRENDA::P22567 (432 letters) >FitnessBrowser__PS:Dsui_1570 Length = 448 Score = 413 bits (1062), Expect = e-120 Identities = 222/436 (50%), Positives = 290/436 (66%), Gaps = 8/436 (1%) Query: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63 +V W R +PY+N+ R +TFVV G+ + P +D+ LL +LG RLVLVHGSRPQ Sbjct: 12 FVAWFRSVAPYVNAFRGKTFVVAFGGKSISGPLARTFAYDVSLLANLGVRLVLVHGSRPQ 71 Query: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGARLRV 123 IE L +GL R+H R+TDA TL+CVIDAVGS+ + +EA LS + +PM G +RV Sbjct: 72 IEEELQEKGLESRFHAGQRITDADTLDCVIDAVGSVYLEVEALLSQGLPNTPMAGNTIRV 131 Query: 124 AGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIFNLA 183 GGN +TARP+GV++GVD +TG VR+ID +G+ L +IVLLS LG SPTGEIFNL+ Sbjct: 132 VGGNFITARPMGVLDGVDLQYTGAVRKIDAEGLKAQLGLGNIVLLSNLGASPTGEIFNLS 191 Query: 184 CEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHLQRLGNSYQAEL--- 240 E+VA AA L A+KLI QG DA G L+ EL L R+G +L Sbjct: 192 MEEVAEEAAKALGADKLIFLTDSQGATDAEGNLLDEL-TADAAEQLARVGEWLSPDLKRY 250 Query: 241 LDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQLREAGIEDVGGLI 300 L A +A R GV R HI+ Y DGA+L ELFT G GT+V ++ + LR+A +D+GGL+ Sbjct: 251 LPCAVRASRRGVGRVHIIGYELDGAVLHELFTHDGVGTVVTRDPLDTLRDAKPDDIGGLV 310 Query: 301 ELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIAD----SEAGELACL 356 LI PLEE G LV R RE+LEREI +FS+VE +G+I+ CAALYP A+ ++ ELACL Sbjct: 311 GLIAPLEEDGTLVHRPRELLEREIGRFSVVEHDGVIVGCAALYPYAEDGQKAKTAELACL 370 Query: 357 AVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARA 416 AV+PE+R G G+ L++ IE +A+ G+K LFVLTTRT HWF ERGF +SV+ LP + Sbjct: 371 AVSPEHRRWGYGERLMQHIEGKAKAAGVKRLFVLTTRTTHWFIERGFALASVDELPEEKR 430 Query: 417 SLYNFQRNSQVFEKSL 432 +YN QR S+V KSL Sbjct: 431 HMYNLQRRSKVLMKSL 446 Lambda K H 0.321 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 553 Number of extensions: 24 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 432 Length of database: 448 Length adjustment: 32 Effective length of query: 400 Effective length of database: 416 Effective search space: 166400 Effective search space used: 166400 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 51 (24.3 bits)
Align candidate Dsui_1570 Dsui_1570 (amino-acid N-acetyltransferase)
to HMM TIGR01890 (argA: amino-acid N-acetyltransferase (EC 2.3.1.1))
../bin/blast/fastacmd -i /tmp/list.5565.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.5565.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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