Align Histidinol-phosphate aminotransferase; EC 2.6.1.9; Imidazole acetol-phosphate transaminase (uncharacterized)
to candidate Dsui_1414 Dsui_1414 histidinol-phosphate aminotransferase
Query= curated2:Q48ED0 (350 letters) >FitnessBrowser__PS:Dsui_1414 Length = 395 Score = 459 bits (1180), Expect = e-134 Identities = 239/356 (67%), Positives = 272/356 (76%), Gaps = 6/356 (1%) Query: 1 MSKFWSPFVSGLVPYVPGEQPKLTRLVKLNTNENPYGPSPKAVEAMRAALTDD---LRLY 57 MSKFWSP V+ L PYVPGEQPKL LVKLNTNENPY PSPK V AM+A + D LRLY Sbjct: 38 MSKFWSPLVNRLTPYVPGEQPKLPNLVKLNTNENPYPPSPKTVAAMQAEIGHDGASLRLY 97 Query: 58 PDPNSDLLKHAVADYYK---VQPNQVFLGNGSDEVLAHIFHALFQHDASLLFPDISYSFY 114 PDP++D LK AVA +Y + QVF+GNGSDEVLAH+F AL QHDA LL+PDISYSFY Sbjct: 98 PDPSADRLKEAVAAFYGEFGIGARQVFVGNGSDEVLAHVFMALLQHDAPLLYPDISYSFY 157 Query: 115 PVYCGLYGIDYEMIALDDQFQIRAEDYAKPNAGIIFPNPNAPTGCLLGLDKVEQIIKASP 174 PVY GLYGI E +ALD + I Y + N GIIFPNPNAPTG LL L ++E ++ A+ Sbjct: 158 PVYAGLYGISAETVALDGDYGIDLSAYRRANGGIIFPNPNAPTGRLLPLGEIEALLTANT 217 Query: 175 DSVVVVDEAYIDFGGETAITLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHSDLIEALER 234 +SVVVVDEAY+DFGG+TAI LV+R+PNLLV TLSKSRSLAGLRVG AVGH DLIEALER Sbjct: 218 ESVVVVDEAYVDFGGDTAIALVNRFPNLLVVHTLSKSRSLAGLRVGYAVGHPDLIEALER 277 Query: 235 VKNSFNSYPLDRMANVGGAAAFEDREHFESTRNKVIESREALVEQLQGKGFEVLPSAANF 294 VKNSFNSYPLDR+A G AA EDR F+ TRN VI SRE LV L GF+VLPSAANF Sbjct: 278 VKNSFNSYPLDRIAIAGAVAALEDRAWFDRTRNAVIASREQLVSDLTLLGFQVLPSAANF 337 Query: 295 IFARHPQHDAAALAAKLREQGVIVRHFKQQRIAQFLRISIGTPEQHQALLEGLSDI 350 +FARHP D A LA LR++ +IVRHFK RI QFLRI+IGT EQ AL+ L +I Sbjct: 338 VFARHPGRDGAELAQALRQRSIIVRHFKAPRIDQFLRITIGTDEQCGALVAALKEI 393 Lambda K H 0.319 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 496 Number of extensions: 18 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 350 Length of database: 395 Length adjustment: 30 Effective length of query: 320 Effective length of database: 365 Effective search space: 116800 Effective search space used: 116800 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate Dsui_1414 Dsui_1414 (histidinol-phosphate aminotransferase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.24934.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.24934.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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