Align N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; EC 1.2.1.38; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase (uncharacterized)
to candidate CA265_RS18540 CA265_RS18540 N-acetyl-gamma-glutamyl-phosphate reductase
Query= curated2:A6KXY5 (322 letters) >FitnessBrowser__Pedo557:CA265_RS18540 Length = 326 Score = 401 bits (1031), Expect = e-116 Identities = 196/325 (60%), Positives = 246/325 (75%), Gaps = 5/325 (1%) Query: 2 IKAGIIGGAGYTAGELIRLLINHPDVDIKFINSSSNAGNKITDVHEGLYGETDLVFTDEL 61 IKAGIIGGAGYT GE++R+L+NHP+V+I F+NS+SNAGN I+DVH L G+TDL F ++ Sbjct: 3 IKAGIIGGAGYTGGEMLRILVNHPNVEIAFVNSTSNAGNLISDVHTDLIGDTDLKFVSDI 62 Query: 62 PLDEIDVLFFCTAHGDTKKFMDSHNVPEDLKIIDLSMDYRIKSD----DHDFIYGLPELN 117 P D IDVLF C HGD KKF+ ++ + +++KIIDLS D+R+ ++ DF+YGLPELN Sbjct: 63 PQD-IDVLFLCVGHGDAKKFLTANPIKDNIKIIDLSQDFRLHANASFSTKDFVYGLPELN 121 Query: 118 RRAICHSKHVANPGCFATCIQLGLLPLAKHLLLNEDIMVNAITGSTGAGVKPGATSHFSW 177 R I +K++ANPGCFATCIQLGLLPLA L+ ++ +NA TGSTGAG TSHFSW Sbjct: 122 RDKIKAAKNIANPGCFATCIQLGLLPLAAKGLIQNEVHINATTGSTGAGQSLSTTSHFSW 181 Query: 178 RNNNMSIYKPFSHQHVPEIKQSLKQLQNSFNAEIDFIPYRGDFPRGIFATLVVKCKVELE 237 RNNN+SIYK F HQH+ EI +SL QLQ S + ++FIP RG F RGI A + ++ + LE Sbjct: 182 RNNNLSIYKAFEHQHLNEISESLLQLQPSISEALNFIPQRGAFTRGILAAMYLESDLSLE 241 Query: 238 ELVKMYQDYYAEDSFVHIVDKNIDLKQVVNTNKCLIHLEKHGDKLLVISCIDNLLKGASG 297 E +Y+ YY+ F H+ KNIDLKQVVNTNK L+HLEKHG KL +IS IDNLLKGASG Sbjct: 242 EAQNIYEAYYSAHPFTHVSRKNIDLKQVVNTNKALVHLEKHGGKLFIISIIDNLLKGASG 301 Query: 298 QAVHNMNLMFNLEETVGLRLKPSAF 322 QAV NMNLMF L+ET GL+LK + F Sbjct: 302 QAVQNMNLMFGLDETAGLKLKAAYF 326 Lambda K H 0.321 0.139 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 334 Number of extensions: 9 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 322 Length of database: 326 Length adjustment: 28 Effective length of query: 294 Effective length of database: 298 Effective search space: 87612 Effective search space used: 87612 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 48 (23.1 bits)
Align candidate CA265_RS18540 CA265_RS18540 (N-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01850 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.27731.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.27731.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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