Align ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) (characterized)
to candidate CA265_RS15825 CA265_RS15825 ketol-acid reductoisomerase
Query= BRENDA::P05793 (491 letters) >FitnessBrowser__Pedo557:CA265_RS15825 Length = 493 Score = 696 bits (1796), Expect = 0.0 Identities = 353/493 (71%), Positives = 400/493 (81%), Gaps = 3/493 (0%) Query: 1 MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSG 60 MANYFNTL LR++L QLG C FM EF DG + L+GKK+VIVGCGAQGLNQGLN+RDSG Sbjct: 1 MANYFNTLPLREKLNQLGVCDFMDSSEFLDGVNALKGKKLVIVGCGAQGLNQGLNLRDSG 60 Query: 61 LDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSDVVRTVQP 120 LD+SY LRKEAI KR SW+ ATEN F VGTYEELIP AD+VINLTPDKQH+ VV + P Sbjct: 61 LDVSYTLRKEAIEGKRDSWKNATENNFTVGTYEELIPNADVVINLTPDKQHTAVVNAIMP 120 Query: 121 LMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE 180 LMK+GA L YSHGFNIVE G QIRKD+TV+MVAPKCPG+EVR EY RGFGVPTLIAVHPE Sbjct: 121 LMKEGATLLYSHGFNIVEEGMQIRKDLTVIMVAPKCPGSEVRAEYVRGFGVPTLIAVHPE 180 Query: 181 NDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKL 240 NDP+G+G+A AKA+ A TGGHRAGVL+SSFVAEVKSDLMGEQTILCG+LQ GS+L FDK+ Sbjct: 181 NDPQGKGLAQAKAYCAGTGGHRAGVLKSSFVAEVKSDLMGEQTILCGLLQTGSILSFDKM 240 Query: 241 VEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLF 300 VE+G D YA KL+Q+G E ITEALKQGGIT MMDRLSN AK++A+ +SE+LK+IM PLF Sbjct: 241 VEKGIDAGYASKLVQYGVEVITEALKQGGITAMMDRLSNVAKIKAFEISEELKDIMRPLF 300 Query: 301 QKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVL 360 QKH DDI+SGEFS MM DWAN DK LL WR ETG+TAFE P + KIGEQEYFD L Sbjct: 301 QKHQDDIMSGEFSRTMMEDWANGDKNLLKWRAETGETAFEKTPAGDVKIGEQEYFDNYTL 360 Query: 361 MIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG 420 M+A V+AGVELAFETMV +GI ESAYYESLHE PLIANTIARK+L+EMN VISDTAEYG Sbjct: 361 MVAFVRAGVELAFETMVQAGIKPESAYYESLHETPLIANTIARKKLFEMNRVISDTAEYG 420 Query: 421 NYLFSYACVPLLKPFMAELQPGDLGKAIPE---GAVDNGQLRDVNEAIRSHAIEQVGKKL 477 YLF AC PLL FM ++ +GK E GAVDN +L D+NEAIRSH +EQ+G L Sbjct: 421 CYLFDQACKPLLGDFMKKVDTDLVGKNFNEGKDGAVDNRKLIDINEAIRSHEVEQIGATL 480 Query: 478 RGYMTDMKRIAVA 490 R MT MK I A Sbjct: 481 RKAMTAMKAIKTA 493 Lambda K H 0.317 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 748 Number of extensions: 25 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 491 Length of database: 493 Length adjustment: 34 Effective length of query: 457 Effective length of database: 459 Effective search space: 209763 Effective search space used: 209763 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 52 (24.6 bits)
Align candidate CA265_RS15825 CA265_RS15825 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.22269.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.22269.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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