Align Anthranilate phosphoribosyltransferase; EC 2.4.2.18 (uncharacterized)
to candidate CA265_RS05010 CA265_RS05010 anthranilate phosphoribosyltransferase
Query= curated2:A6GWZ4 (330 letters) >FitnessBrowser__Pedo557:CA265_RS05010 Length = 329 Score = 389 bits (998), Expect = e-113 Identities = 193/326 (59%), Positives = 253/326 (77%), Gaps = 1/326 (0%) Query: 1 MKNILNRLINHETLSKQEAKNMLVNISNGSYNPSQIASFLTVYMMRNITINELAGFREAL 60 MK ILN L +++ S++EAKN+L++IS G++N SQIA+F+T Y MRNIT+ EL GFR+A+ Sbjct: 1 MKKILNHLFENKSFSREEAKNILISISEGAFNSSQIAAFITAYAMRNITVQELQGFRDAM 60 Query: 61 LELCIPIDLSAYNTIDLCGTGGDGKDTFNISTLASFVTAGAGIKVAKHGNYGVSSISGSS 120 L++C+ ++LS Y+ IDLCGTGGDGKDTFNISTL+SFV AGAG VAKHGNYGVSS GSS Sbjct: 61 LDMCVKVNLSGYDLIDLCGTGGDGKDTFNISTLSSFVVAGAGHHVAKHGNYGVSSGCGSS 120 Query: 121 NVMENLGIKFSNDPIFLEKCIDQAGICVLHAPLFHPAMKNVAPIRKELAVKTFFNMLGPM 180 NVME LG F+N+ L++ +D AGIC LHAPLF+PAMK VAPIRKEL VKTFFNMLGPM Sbjct: 121 NVMEYLGYTFTNNEDTLKRNLDAAGICFLHAPLFNPAMKIVAPIRKELGVKTFFNMLGPM 180 Query: 181 VNPSFPKNQLVGVFNLELARMYSYLYQNTKTNYTILHSLDGYDEISLTGNTKTITNKMEG 240 VNP PK Q+VGVF+LELAR+Y+YLYQ+T +YTI+H+L+GYDE+SLT + KT +NK E Sbjct: 181 VNPGQPKYQMVGVFSLELARLYAYLYQDTDKSYTIVHALEGYDEVSLTCDVKTFSNKGEQ 240 Query: 241 MLKPEDFGVNLLSQTDIQGGTTIQESAQMFVTILSGKGTEAQNNVVCANAGMAIATVNNL 300 +L +D G + + I+GG T++ SA++F+ +L+GK T+ QNNVV N+ +AI T+ Sbjct: 241 ILTLQDMGFDKVEVNAIKGGDTVESSAKIFMDVLNGKATDVQNNVVLCNSALAIKTIKPQ 300 Query: 301 NPIQG-FELAKESLLSGKGLETLKKL 325 F A+ESL+S K L + K+L Sbjct: 301 QSFADCFYEAEESLMSKKALNSFKQL 326 Lambda K H 0.317 0.133 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 370 Number of extensions: 16 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 330 Length of database: 329 Length adjustment: 28 Effective length of query: 302 Effective length of database: 301 Effective search space: 90902 Effective search space used: 90902 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 49 (23.5 bits)
Align candidate CA265_RS05010 CA265_RS05010 (anthranilate phosphoribosyltransferase)
to HMM TIGR01245 (trpD: anthranilate phosphoribosyltransferase (EC 2.4.2.18))
../bin/blast/fastacmd -i /tmp/list.5468.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.5468.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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