Align Histidinol-phosphatase [alternative form] (EC 3.1.3.15) (characterized)
to candidate GFF2154 PGA1_c21860 putative histidinol-phosphate phosphatase HisN
Query= reanno::Phaeo:GFF2154 (250 letters) >FitnessBrowser__Phaeo:GFF2154 Length = 250 Score = 495 bits (1275), Expect = e-145 Identities = 250/250 (100%), Positives = 250/250 (100%) Query: 1 MADAARQAILPYFRSAGLQSDNKLDEGFDPVTIADRAAEQAMRSVLSELRPEDSILGEEF 60 MADAARQAILPYFRSAGLQSDNKLDEGFDPVTIADRAAEQAMRSVLSELRPEDSILGEEF Sbjct: 1 MADAARQAILPYFRSAGLQSDNKLDEGFDPVTIADRAAEQAMRSVLSELRPEDSILGEEF 60 Query: 61 GETHGQSGRTWVLDPIDGTRGFISGTPTWGVLIALGDADGPFLGIVDQPYIGERFIGTPE 120 GETHGQSGRTWVLDPIDGTRGFISGTPTWGVLIALGDADGPFLGIVDQPYIGERFIGTPE Sbjct: 61 GETHGQSGRTWVLDPIDGTRGFISGTPTWGVLIALGDADGPFLGIVDQPYIGERFIGTPE 120 Query: 121 GASLTGPLGHSALVTRATDSLSEATLFTTFPEVGTEAERAAFQRVSAQVRLTRYGMDCYA 180 GASLTGPLGHSALVTRATDSLSEATLFTTFPEVGTEAERAAFQRVSAQVRLTRYGMDCYA Sbjct: 121 GASLTGPLGHSALVTRATDSLSEATLFTTFPEVGTEAERAAFQRVSAQVRLTRYGMDCYA 180 Query: 181 YALLAAGQCDLVIEAGLNAYDIQAPIAVIQAAGGVVTNWQGEPAHEGGQVLAAATAELHA 240 YALLAAGQCDLVIEAGLNAYDIQAPIAVIQAAGGVVTNWQGEPAHEGGQVLAAATAELHA Sbjct: 181 YALLAAGQCDLVIEAGLNAYDIQAPIAVIQAAGGVVTNWQGEPAHEGGQVLAAATAELHA 240 Query: 241 AALALIQQTA 250 AALALIQQTA Sbjct: 241 AALALIQQTA 250 Lambda K H 0.317 0.134 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 345 Number of extensions: 7 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 250 Length of database: 250 Length adjustment: 24 Effective length of query: 226 Effective length of database: 226 Effective search space: 51076 Effective search space used: 51076 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 46 (22.3 bits)
Align candidate GFF2154 PGA1_c21860 (putative histidinol-phosphate phosphatase HisN)
to HMM TIGR02067 (hisN: histidinol-phosphatase (EC 3.1.3.15))
../bin/blast/fastacmd -i /tmp/list.11143.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.11143.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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