Align Histidinol-phosphate aminotransferase; EC 2.6.1.9; Imidazole acetol-phosphate transaminase (uncharacterized)
to candidate PP_0967 PP_0967 Histidinol-phosphate aminotransferase
Query= curated2:Q48ED0 (350 letters) >FitnessBrowser__Putida:PP_0967 Length = 348 Score = 575 bits (1483), Expect = e-169 Identities = 286/348 (82%), Positives = 308/348 (88%) Query: 1 MSKFWSPFVSGLVPYVPGEQPKLTRLVKLNTNENPYGPSPKAVEAMRAALTDDLRLYPDP 60 MS+FWSPFV LVPYVPGEQPKL RLVKLNTNENPYGPSPKA+EAMR L D+LRLYPDP Sbjct: 1 MSRFWSPFVKDLVPYVPGEQPKLARLVKLNTNENPYGPSPKALEAMRGELNDNLRLYPDP 60 Query: 61 NSDLLKHAVADYYKVQPNQVFLGNGSDEVLAHIFHALFQHDASLLFPDISYSFYPVYCGL 120 N D LK AVA+YY V P QVF+GNGSDEVLAHIFH LFQHDA LLFPDISYSFYPVYCGL Sbjct: 61 NGDRLKQAVAEYYGVTPAQVFVGNGSDEVLAHIFHGLFQHDAPLLFPDISYSFYPVYCGL 120 Query: 121 YGIDYEMIALDDQFQIRAEDYAKPNAGIIFPNPNAPTGCLLGLDKVEQIIKASPDSVVVV 180 YGI +E +ALD+QFQIR EDY KPNAGIIFPNPNAPTGCL+ L VE++++A+ DSVVVV Sbjct: 121 YGIAFEQVALDEQFQIRIEDYKKPNAGIIFPNPNAPTGCLMPLQAVEELLQANRDSVVVV 180 Query: 181 DEAYIDFGGETAITLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHSDLIEALERVKNSFN 240 DEAYIDFGGETAI+LVDRY NLLVTQTLSKSRSLAGLRVGLAVGH DLIEALER+KNSFN Sbjct: 181 DEAYIDFGGETAISLVDRYDNLLVTQTLSKSRSLAGLRVGLAVGHPDLIEALERIKNSFN 240 Query: 241 SYPLDRMANVGGAAAFEDREHFESTRNKVIESREALVEQLQGKGFEVLPSAANFIFARHP 300 SYPLDR A VG A AFEDRE+FE T KVI+SRE LV QLQ KGFEVLPSAANFIFARHP Sbjct: 241 SYPLDRAAIVGAAVAFEDREYFEETCRKVIDSREVLVGQLQAKGFEVLPSAANFIFARHP 300 Query: 301 QHDAAALAAKLREQGVIVRHFKQQRIAQFLRISIGTPEQHQALLEGLS 348 Q DA LAA+LREQGVIVRHFKQ RIAQFLRI+IGTPE +QALL+ LS Sbjct: 301 QQDAGELAARLREQGVIVRHFKQPRIAQFLRITIGTPEMNQALLDALS 348 Lambda K H 0.319 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 498 Number of extensions: 12 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 350 Length of database: 348 Length adjustment: 29 Effective length of query: 321 Effective length of database: 319 Effective search space: 102399 Effective search space used: 102399 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate PP_0967 PP_0967 (Histidinol-phosphate aminotransferase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.9208.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.9208.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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