Align isochorismate lyase (EC 4.2.99.21) (characterized)
to candidate GFF2591 PS417_13205 isochorismate-pyruvate lyase
Query= BRENDA::Q51507 (101 letters) >FitnessBrowser__WCS417:GFF2591 Length = 102 Score = 138 bits (348), Expect = 1e-38 Identities = 65/98 (66%), Positives = 77/98 (78%) Query: 1 MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPE 60 MKTPE CTGL+DIR+AID +D I+ ALG RM YVKAAS FK +A+I APERVAAMLP+ Sbjct: 1 MKTPEHCTGLSDIRQAIDSLDQQIIDALGLRMQYVKAASAFKPDQASIAAPERVAAMLPQ 60 Query: 61 RARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTR 98 R +WA+ GLD F+EGLF QIIHWYIAEQ +W Q + Sbjct: 61 RRQWAQAVGLDGEFIEGLFNQIIHWYIAEQTAFWLQKK 98 Lambda K H 0.322 0.135 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 71 Number of extensions: 1 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 101 Length of database: 102 Length adjustment: 11 Effective length of query: 90 Effective length of database: 91 Effective search space: 8190 Effective search space used: 8190 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 40 (20.0 bits)
Align candidate GFF2591 PS417_13205 (isochorismate-pyruvate lyase)
to HMM PF01817 (CM_2)
../bin/blast/fastacmd -i /tmp/list.15921.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.15921.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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