Align Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 (characterized)
to candidate Ac3H11_4277 Homoserine O-acetyltransferase (EC 2.3.1.31)
Query= SwissProt::Q8TME4 (540 letters) >FitnessBrowser__acidovorax_3H11:Ac3H11_4277 Length = 401 Score = 342 bits (877), Expect = 2e-98 Identities = 175/388 (45%), Positives = 242/388 (62%), Gaps = 9/388 (2%) Query: 36 PGTFGLESGKTLSGVRVEYEMYGKMNADKSNVILICHALTGDAHAAGFHEG-DKKPGWWE 94 P L+SG +L + YE YG +NAD+SN +L+CHAL H AG + G DK GWW+ Sbjct: 13 PEVLPLQSGASLRDYHLAYETYGTLNADRSNAVLVCHALNASHHVAGVYAGQDKSEGWWD 72 Query: 95 IVIGPNKAFDTEKYCVICSNILGGCKGSTGPSSIDPETGKHYGISFPVITVKDMVNAQKK 154 +IGP K DT+++ VI N LG C GSTGP P+TG+ YG FPV+TV+D VNAQ + Sbjct: 73 NMIGPGKPVDTDRFFVIGVNNLGSCFGSTGPMHNHPDTGEVYGADFPVVTVEDWVNAQAR 132 Query: 155 LIEHLGVKQLFAVAGGSMGGMQVLQWTVSYPEMVRKAIAIATTASTTPQQIAFGAIGRKA 214 L++ LG+ QL AV GGS+GGMQ L WT+ YPE +R A+ +A+ + T + IAF + R+A Sbjct: 133 LLDRLGITQLAAVLGGSLGGMQALSWTLQYPERMRHAVVVASAPNLTAENIAFNEVARRA 192 Query: 215 ITDDPKWNGGDYYGK-EIPSQGLALARMIGHITYLSDASMQNKFGRLQQDTDKSGIKGTT 273 I DP ++GG +Y IP +GL +ARMIGHITYLSD M KFGR + +G+ Sbjct: 193 IVTDPDFHGGHFYRHGVIPKRGLRIARMIGHITYLSDDVMNEKFGRSLRAPTLPAARGSL 252 Query: 274 GTEGKNSSEISSEISSISSEISSELSYDFTPNFQVESYLNYKGDNFTKRFDANSYLYITK 333 EG + + ++ L FQ+ESYL Y+GD F+ FDAN+YL IT+ Sbjct: 253 PPEGAGPAR-----GGPAPDLRDYLYSTQDIEFQIESYLRYQGDKFSDYFDANTYLLITR 307 Query: 334 AVDYFDLAK--NGSLIEGFSGVTAKYLVISISSDWLYPPYQSQEIVSALTANGVDARYEE 391 A+DYFD A+ G+L + TAK+L++S ++DW + P +S+EIV AL N Y E Sbjct: 308 ALDYFDPARAHGGNLTRALARATAKFLLVSFTTDWRFSPQRSREIVKALLDNRRRVSYAE 367 Query: 392 IRSQHGHDAFLLEEGQLSYLLRSFLSHI 419 I + HGHDAFLL++ + ++RS+ I Sbjct: 368 IDAPHGHDAFLLDDARYMGVMRSYFDSI 395 Lambda K H 0.315 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 545 Number of extensions: 25 Number of successful extensions: 5 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 540 Length of database: 401 Length adjustment: 33 Effective length of query: 507 Effective length of database: 368 Effective search space: 186576 Effective search space used: 186576 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 51 (24.3 bits)
Align candidate Ac3H11_4277 (Homoserine O-acetyltransferase (EC 2.3.1.31))
to HMM TIGR01392 (metX: homoserine O-acetyltransferase (EC 2.3.1.31))
../bin/blast/fastacmd -i /tmp/list.8864.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.8864.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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