Align Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase; EC 1.2.1.41 (characterized)
to candidate AZOBR_RS04075 AZOBR_RS04075 gamma-glutamyl phosphate reductase
Query= SwissProt::P07004 (417 letters) >FitnessBrowser__azobra:AZOBR_RS04075 Length = 426 Score = 351 bits (901), Expect = e-101 Identities = 186/408 (45%), Positives = 260/408 (63%), Gaps = 4/408 (0%) Query: 5 MGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSEAMLD 64 +G AA+ A+ +LA + S K++ L A + A+ I AN DVA A+ GL+ M++ Sbjct: 18 LGRAARAAAAELATVPSPSKDQALRAAAAAIRARKAEIQAANDADVAAAKDRGLAGPMIE 77 Query: 65 RLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYEARPN 124 RLAL AR++ +A + + + DP+G VI +GL ++R RVPLGVIG+IYE+RPN Sbjct: 78 RLALNDARIEAMAKGLEDIADFPDPIGGVIAEWTRPNGLAIQRVRVPLGVIGIIYESRPN 137 Query: 125 VTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPDRALV 184 VT D LCLK+GNA ILRGG E+ R++ A A + D L++ GLP A+Q + DRA V Sbjct: 138 VTADAGGLCLKSGNAAILRGGSESIRSSHAIAACLADGLRAAGLPEAAIQLVPTTDRAAV 197 Query: 185 SEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALKVIVN 244 ML M +ID+++PRGG L + E+S IPVI G +YVD + +A KV++N Sbjct: 198 GHMLTMRDFIDVIVPRGGKSLIQRIAEESRIPVIKHLDGNNTVYVDAGADPEKARKVVMN 257 Query: 245 AKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAKVVAV 304 AK +R S C ETLLV++ IAD+ LP L K + ++G + DAAA QA +V AV Sbjct: 258 AKMRRTSICGAAETLLVDRKIADAMLPVLVKDLLDAGCAVRGDAAA----QAVDPRVTAV 313 Query: 305 KAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTRDMRNAQRFVNEVDSSAV 364 AE++D EFL + +V +D AI HI HG+ H+DAI+T D A+RF+ +DS V Sbjct: 314 TAEDWDTEFLDAIIACGVVDGVDGAIDHINRHGSHHTDAIVTEDPAAAERFLQRIDSGIV 373 Query: 365 YVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGD 412 NAST+F DGG+FG+GAE+ +ST K HARGP+G E LT+YK++ GD Sbjct: 374 LWNASTQFADGGEFGMGAEIGISTDKFHARGPVGAEQLTSYKYVVRGD 421 Lambda K H 0.317 0.133 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 462 Number of extensions: 19 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 417 Length of database: 426 Length adjustment: 32 Effective length of query: 385 Effective length of database: 394 Effective search space: 151690 Effective search space used: 151690 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.9 bits)
Align candidate AZOBR_RS04075 AZOBR_RS04075 (gamma-glutamyl phosphate reductase)
to HMM TIGR00407 (proA: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41))
../bin/blast/fastacmd -i /tmp/list.21087.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.21087.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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