Align Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 (characterized)
to candidate PfGW456L13_1217 Anthranilate synthase, aminase component (EC 4.1.3.27)
Query= SwissProt::P20579 (493 letters) >FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_1217 Length = 493 Score = 873 bits (2256), Expect = 0.0 Identities = 436/490 (88%), Positives = 457/490 (93%) Query: 1 MNREEFLRLAAVGYNRIPLACETLADFDTPLSIYLKLADQPNSYLLESVQGGEKWGRYSM 60 M REEFLRLAA GYNRIPLACETLADFDTPLSIYLKLAD+PNSYLLESVQGGEKWGRYS+ Sbjct: 1 MIREEFLRLAAAGYNRIPLACETLADFDTPLSIYLKLADEPNSYLLESVQGGEKWGRYSI 60 Query: 61 IGLPSRTVMRVHGYHVSILHDGVEVESHDVEDPLAFVESFKDRYKVADIPGLPRFNGGLV 120 IGLP RTV+RVH +HVS+ DGVE ESHDVEDPLAFVE+FK RY V I GLPRFNGGLV Sbjct: 61 IGLPCRTVLRVHDHHVSVTVDGVETESHDVEDPLAFVETFKARYNVPTIAGLPRFNGGLV 120 Query: 121 GYFGYDCVRYVEKRLGVSPNPDPLGVPDILLMVSDAVVVFDNLAGKMHAIVLVDPAEEQA 180 GYFGYDCVRYVEKRLG PNPDPLGVPDILLMVSDAVVVFDNLAGKMHAIVL DP+++ A Sbjct: 121 GYFGYDCVRYVEKRLGKCPNPDPLGVPDILLMVSDAVVVFDNLAGKMHAIVLADPSQDDA 180 Query: 181 FEQGQARLQGLLETLRQPITPRRGLDLSGPQAAEPEFRSSYTREDYENAVGRIKEYILAG 240 FEQGQARL+ LLE LRQPITPRRGLD S Q+A+P FRSS+T++DYE AV IKEYILAG Sbjct: 181 FEQGQARLEELLERLRQPITPRRGLDFSKQQSADPVFRSSFTQDDYEKAVDTIKEYILAG 240 Query: 241 DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNL 300 DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNL Sbjct: 241 DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNL 300 Query: 301 VTVRPIAGTRPRGATEEADRALEDDLLSDDKEIAEHLMLIDLGRNDVGRVSSTGSVRLTE 360 +TVRPIAGTRPRGA EEAD ALE+DLLSDDKEIAEHLMLIDLGRND GRVS GSV+LTE Sbjct: 301 ITVRPIAGTRPRGANEEADLALEEDLLSDDKEIAEHLMLIDLGRNDTGRVSEIGSVKLTE 360 Query: 361 KMVIERYSNVMHIVSNVAGQLREGLTAMDALRAILPAGTLSGAPKIRAMEIIDELEPVKR 420 KMVIERYSNVMHIVSNV GQL+ GLTAMDALRAILPAGTLSGAPKIRAMEIIDELEPVKR Sbjct: 361 KMVIERYSNVMHIVSNVTGQLKSGLTAMDALRAILPAGTLSGAPKIRAMEIIDELEPVKR 420 Query: 421 GVYGGAVGYFAWNGNMDTAIAIRTAVINDGELHVQAGGGIVADSVPALEWEETINKRRAM 480 GVYGGAVGYFAWNGNMDTAIAIRTAVI +GELHVQAGGGIVADSVPALEWEET+NKRRAM Sbjct: 421 GVYGGAVGYFAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETLNKRRAM 480 Query: 481 FRAVALAEQT 490 FRAVALAEQT Sbjct: 481 FRAVALAEQT 490 Lambda K H 0.320 0.138 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 901 Number of extensions: 21 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 493 Length of database: 493 Length adjustment: 34 Effective length of query: 459 Effective length of database: 459 Effective search space: 210681 Effective search space used: 210681 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 52 (24.6 bits)
Align candidate PfGW456L13_1217 (Anthranilate synthase, aminase component (EC 4.1.3.27))
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))
../bin/blast/fastacmd -i /tmp/list.3408.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.3408.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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