Align Histidinol-phosphate aminotransferase; EC 2.6.1.9; Imidazole acetol-phosphate transaminase (uncharacterized)
to candidate AO353_02065 AO353_02065 aspartate aminotransferase
Query= curated2:Q9RI00 (366 letters) >FitnessBrowser__pseudo3_N2E3:AO353_02065 Length = 370 Score = 446 bits (1148), Expect = e-130 Identities = 237/371 (63%), Positives = 279/371 (75%), Gaps = 11/371 (2%) Query: 1 MSADFLALAVPGVQKLSPYVTGKPIDELARELGIEPARIVKLASNENPLGPNPRVLEAVR 60 MS DFLALA PGVQ+LSPYV GKP+DELAREL I+PA+IVKLASNENPLG +P+ L A+R Sbjct: 1 MSGDFLALAQPGVQQLSPYVPGKPVDELARELDIDPAKIVKLASNENPLGASPKALAAIR 60 Query: 61 GELSELTRYPDGSGFRLKAKLAERFGLKSEQITLGNGSNDIIDLVARC-CGAGPNAVFSA 119 EL+ELTRYPDG+GF LK LAE+ ++ Q+TLGNGSNDI++LVAR G NAVFS Sbjct: 61 EELAELTRYPDGNGFALKTLLAEQCRVELNQVTLGNGSNDILELVARAYLAPGLNAVFSE 120 Query: 120 HAFAAYPLCTQAAGAESRVVPAVDYGHDLDGMLKAIDEQTAVIFIANPNNPTGNLVRAQA 179 HAFA YP+ TQA GAE+RV+PA D+GHDL ML+AID T V+FIANPNNPTG A+A Sbjct: 121 HAFAVYPIVTQAVGAEARVIPAKDWGHDLSAMLEAIDSNTRVVFIANPNNPTGTWFDAEA 180 Query: 180 LESFLDRVPERVLVVLDEAYIEFYRGTNC-QRLNYLVRYPNLLVSRTLSKVYGLAGLRVG 238 L+ FL VPERVLVVLDEAYIE+ G++ L++L YPNLLVSRT SK YGLA LRVG Sbjct: 181 LDEFLQDVPERVLVVLDEAYIEYAEGSDLPDGLDFLAAYPNLLVSRTFSKAYGLAALRVG 240 Query: 239 YSASSPQIADVLNRVRQPFNVNSLALVAACAG-----WMTSSIWLKGGGWIAPVWELEQG 293 Y S+ +ADVLNRVRQPFNVNSLAL AACA ++ S L G + +LE G Sbjct: 241 YGLSTAVVADVLNRVRQPFNVNSLALAAACAALQDDEYLAESRRLNESG----MQQLEAG 296 Query: 294 LAELRLKWIPSRGNFLAVDLGRDAAPINAGLLRDGVIVRPIAGYDCPTFLRVSIGTEQEN 353 EL L WIPS+GNF+ VDLGR AAP+ GLL +GVIVRP+A Y P LR++IG EN Sbjct: 297 FRELGLSWIPSKGNFICVDLGRVAAPVFQGLLHEGVIVRPVANYGMPNHLRITIGLPAEN 356 Query: 354 ARFLEALRVVL 364 +RFLEAL VL Sbjct: 357 SRFLEALAKVL 367 Lambda K H 0.320 0.138 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 463 Number of extensions: 17 Number of successful extensions: 4 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 366 Length of database: 370 Length adjustment: 30 Effective length of query: 336 Effective length of database: 340 Effective search space: 114240 Effective search space used: 114240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate AO353_02065 AO353_02065 (aspartate aminotransferase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.3078.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.3078.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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