Align Histidinol-phosphate aminotransferase; EC 2.6.1.9; Imidazole acetol-phosphate transaminase (uncharacterized)
to candidate AO356_03460 AO356_03460 aspartate aminotransferase
Query= curated2:Q9RI00 (366 letters) >FitnessBrowser__pseudo5_N2C3_1:AO356_03460 Length = 370 Score = 443 bits (1140), Expect = e-129 Identities = 236/371 (63%), Positives = 277/371 (74%), Gaps = 11/371 (2%) Query: 1 MSADFLALAVPGVQKLSPYVTGKPIDELARELGIEPARIVKLASNENPLGPNPRVLEAVR 60 MS +FLALA PGVQ+LSPYV GKP+DELAREL ++PA IVKLASNENPLG +P+ L A+R Sbjct: 1 MSGNFLALAQPGVQQLSPYVPGKPVDELARELDLDPASIVKLASNENPLGASPKALAAIR 60 Query: 61 GELSELTRYPDGSGFRLKAKLAERFGLKSEQITLGNGSNDIIDLVARC-CGAGPNAVFSA 119 EL+ELTRYPDG+GF LK+ LAER G++ Q+TLGNGSNDI++LVAR G NAVFS Sbjct: 61 DELAELTRYPDGNGFALKSLLAERCGVELNQVTLGNGSNDILELVARAYLAPGLNAVFSE 120 Query: 120 HAFAAYPLCTQAAGAESRVVPAVDYGHDLDGMLKAIDEQTAVIFIANPNNPTGNLVRAQA 179 HAFA YP+ TQA GA++ VVPA D+GHDL ML AID T V+FIANPNNPTG AQA Sbjct: 121 HAFAVYPIATQAVGADAHVVPAKDWGHDLPAMLAAIDANTRVVFIANPNNPTGTWFDAQA 180 Query: 180 LESFLDRVPERVLVVLDEAYIEFYRGTNC-QRLNYLVRYPNLLVSRTLSKVYGLAGLRVG 238 L+ FL VP VLVVLDEAYIE+ G++ L++L YPNLLVSRT SK YGLA LRVG Sbjct: 181 LDDFLQDVPAHVLVVLDEAYIEYAEGSDLPDGLDFLAAYPNLLVSRTFSKAYGLASLRVG 240 Query: 239 YSASSPQIADVLNRVRQPFNVNSLALVAACA-----GWMTSSIWLKGGGWIAPVWELEQG 293 Y S+ +ADVLNRVRQPFNVNS AL AACA ++ S L G + +LE G Sbjct: 241 YGLSTAVVADVLNRVRQPFNVNSFALAAACAALQDEAYLAESRRLNAAG----MQQLEAG 296 Query: 294 LAELRLKWIPSRGNFLAVDLGRDAAPINAGLLRDGVIVRPIAGYDCPTFLRVSIGTEQEN 353 L EL L WIPS+GNF+ VDLGR AAP+ GLLR+GVIVRP+A Y P LR++IG EN Sbjct: 297 LRELGLGWIPSKGNFICVDLGRVAAPVYQGLLREGVIVRPVANYGMPNHLRITIGLPTEN 356 Query: 354 ARFLEALRVVL 364 +RFLEAL VL Sbjct: 357 SRFLEALSKVL 367 Lambda K H 0.320 0.138 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 476 Number of extensions: 22 Number of successful extensions: 4 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 366 Length of database: 370 Length adjustment: 30 Effective length of query: 336 Effective length of database: 340 Effective search space: 114240 Effective search space used: 114240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate AO356_03460 AO356_03460 (aspartate aminotransferase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.13056.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.13056.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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