Align Histidinol-phosphate aminotransferase; EC 2.6.1.9; Imidazole acetol-phosphate transaminase (uncharacterized)
to candidate AO356_06960 AO356_06960 histidinol-phosphate aminotransferase
Query= curated2:Q48ED0 (350 letters) >FitnessBrowser__pseudo5_N2C3_1:AO356_06960 Length = 350 Score = 591 bits (1524), Expect = e-174 Identities = 292/350 (83%), Positives = 315/350 (90%) Query: 1 MSKFWSPFVSGLVPYVPGEQPKLTRLVKLNTNENPYGPSPKAVEAMRAALTDDLRLYPDP 60 MSKFWSPFV LVPYVPGEQPKLTRLVKLNTNENPYGPSPKA+ AM+ L D+LRLYPDP Sbjct: 1 MSKFWSPFVKNLVPYVPGEQPKLTRLVKLNTNENPYGPSPKALAAMQTELNDNLRLYPDP 60 Query: 61 NSDLLKHAVADYYKVQPNQVFLGNGSDEVLAHIFHALFQHDASLLFPDISYSFYPVYCGL 120 NSDLLK AVA YY VQ NQVFLGNGSDEVLAHIFH L QHD LLFPDISYSFYPVYCGL Sbjct: 61 NSDLLKGAVARYYGVQSNQVFLGNGSDEVLAHIFHGLLQHDQPLLFPDISYSFYPVYCGL 120 Query: 121 YGIDYEMIALDDQFQIRAEDYAKPNAGIIFPNPNAPTGCLLGLDKVEQIIKASPDSVVVV 180 YGI ++ + LD+QF+I DYAKPN GIIFPNPNAPTGCLL LD VE+I+KASPDSVVVV Sbjct: 121 YGIQFDAVPLDEQFRIDPADYAKPNGGIIFPNPNAPTGCLLALDAVERILKASPDSVVVV 180 Query: 181 DEAYIDFGGETAITLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHSDLIEALERVKNSFN 240 DEAYIDFGGETAI+LVDRYPNLLVTQTLSKSRSLAGLRVGLAVGH DLIEALER+KNSFN Sbjct: 181 DEAYIDFGGETAISLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHPDLIEALERIKNSFN 240 Query: 241 SYPLDRMANVGGAAAFEDREHFESTRNKVIESREALVEQLQGKGFEVLPSAANFIFARHP 300 SYPLDR+ANVGGAAAF+DREHF+ T VIE RE +V QL+ KGFEVLPSAANFIFARHP Sbjct: 241 SYPLDRLANVGGAAAFDDREHFDRTCRLVIEHREWVVTQLEAKGFEVLPSAANFIFARHP 300 Query: 301 QHDAAALAAKLREQGVIVRHFKQQRIAQFLRISIGTPEQHQALLEGLSDI 350 +HDAA LAAKLREQGVIVRHFKQ+RIAQFLRISIGTPEQ+QAL+E L ++ Sbjct: 301 RHDAAGLAAKLREQGVIVRHFKQERIAQFLRISIGTPEQNQALIEALGEL 350 Lambda K H 0.319 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 561 Number of extensions: 14 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 350 Length of database: 350 Length adjustment: 29 Effective length of query: 321 Effective length of database: 321 Effective search space: 103041 Effective search space used: 103041 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate AO356_06960 AO356_06960 (histidinol-phosphate aminotransferase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.4876.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.4876.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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