Align Histidinol-phosphate aminotransferase; EC 2.6.1.9; Imidazole acetol-phosphate transaminase (uncharacterized)
to candidate Pf6N2E2_3251 Histidinol-phosphate aminotransferase (EC 2.6.1.9)
Query= curated2:Q48ED0 (350 letters) >FitnessBrowser__pseudo6_N2E2:Pf6N2E2_3251 Length = 350 Score = 587 bits (1514), Expect = e-172 Identities = 291/350 (83%), Positives = 314/350 (89%) Query: 1 MSKFWSPFVSGLVPYVPGEQPKLTRLVKLNTNENPYGPSPKAVEAMRAALTDDLRLYPDP 60 MSKFWSPFV LVPYVPGEQPKLTRLVKLNTNENPYGPSPKA+ AM+ L D+LRLYPDP Sbjct: 1 MSKFWSPFVKNLVPYVPGEQPKLTRLVKLNTNENPYGPSPKALAAMQTELNDNLRLYPDP 60 Query: 61 NSDLLKHAVADYYKVQPNQVFLGNGSDEVLAHIFHALFQHDASLLFPDISYSFYPVYCGL 120 NSDLLK AVA YY VQ NQVFLGNGSDEVLAHIFH L QHD LLFPDISYSFYPVYCGL Sbjct: 61 NSDLLKGAVARYYGVQSNQVFLGNGSDEVLAHIFHGLLQHDQPLLFPDISYSFYPVYCGL 120 Query: 121 YGIDYEMIALDDQFQIRAEDYAKPNAGIIFPNPNAPTGCLLGLDKVEQIIKASPDSVVVV 180 YGI ++ + LD QFQI DYAKPN GIIFPNPNAPTGCLL L+ VEQI+KA+PDSVVVV Sbjct: 121 YGIQFDAVPLDAQFQIDPADYAKPNGGIIFPNPNAPTGCLLALEAVEQILKANPDSVVVV 180 Query: 181 DEAYIDFGGETAITLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHSDLIEALERVKNSFN 240 DEAYIDFGGETAI+LVDRYPNLLVTQTLSKSRSLAGLRVGLAVGH +LIEALER+KNSFN Sbjct: 181 DEAYIDFGGETAISLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHPELIEALERIKNSFN 240 Query: 241 SYPLDRMANVGGAAAFEDREHFESTRNKVIESREALVEQLQGKGFEVLPSAANFIFARHP 300 SYPLDR+ANVGGAAAF+DRE+F+ T VIE RE +V QLQ KGFEVLPSAANFIFARHP Sbjct: 241 SYPLDRLANVGGAAAFDDREYFDRTCRLVIEHREWVVAQLQAKGFEVLPSAANFIFARHP 300 Query: 301 QHDAAALAAKLREQGVIVRHFKQQRIAQFLRISIGTPEQHQALLEGLSDI 350 +HDAA LAAKLREQGVIVRHFKQ+RIAQFLRISIGTPEQ+QAL+E L ++ Sbjct: 301 RHDAAGLAAKLREQGVIVRHFKQERIAQFLRISIGTPEQNQALIEALGEL 350 Lambda K H 0.319 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 553 Number of extensions: 13 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 350 Length of database: 350 Length adjustment: 29 Effective length of query: 321 Effective length of database: 321 Effective search space: 103041 Effective search space used: 103041 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate Pf6N2E2_3251 (Histidinol-phosphate aminotransferase (EC 2.6.1.9))
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.2711.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.2711.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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