Align glutamate 5-kinase (EC 2.7.2.11) (characterized)
to candidate WP_011386430.1 AMB_RS20630 glutamate 5-kinase
Query= BRENDA::P0A7B5 (367 letters) >NCBI__GCF_000009985.1:WP_011386430.1 Length = 370 Score = 260 bits (664), Expect = 5e-74 Identities = 153/367 (41%), Positives = 213/367 (58%), Gaps = 5/367 (1%) Query: 1 MSDSQTLVVKLGTSVLTGGSR-RLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREH 59 ++ ++ L+VK+G+S+L S ++ R + L A A G +++V+SGA+A GR Sbjct: 4 LAAAKRLIVKIGSSLLVDDSTGQVRRGWLETLAADIAACKARGQEVIVVSSGAVAVGRRK 63 Query: 60 LGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARD 119 LG P + KQ AA GQ RL W+ + + I V Q+LLT D E+R R+LNAR Sbjct: 64 LGLVP-PLKLEEKQAAAATGQIRLAHAWQDALAHHQITVAQVLLTLDDSENRRRYLNARS 122 Query: 120 TLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADP 179 TL LL VPVINEND VATAEI+VGDND L+A A + AD L+L +D GLYTADP Sbjct: 123 TLETLLKLGAVPVINENDTVATAEIRVGDNDRLAARVAQMVSADALVLFSDIDGLYTADP 182 Query: 180 RSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKP 239 R +P A I +V+ + + A+AGD S G+GGM TKL AA + AG I G Sbjct: 183 RKDPDARFIPEVHELTPEIEAMAGDPGSAYGSGGMVTKLVAARICLSAGCRMAITRGEPM 242 Query: 240 GVIGDVMEGISVGTLFHAQATPLENRKRWIFGA-PPAGEITVDEGATAAILERGSSLLPK 298 + + +G T F + P RK+WIFG+ P G + +D GA A L +G SLLP Sbjct: 243 HPLKTIEDG-GRCTWFLPNSEPRTARKQWIFGSMKPTGTLVLDAGAARA-LAQGRSLLPA 300 Query: 299 GIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVA 358 GI V+G F RG+ + + + G+ + G+ Y++D R I G S EI+AILG+ Sbjct: 301 GITEVSGAFERGDCVLVKDGSGKVLGRGLVAYSADDSRAIMGRKSGEIEAILGFRGRDEL 360 Query: 359 VHRDDMI 365 +HRDD++ Sbjct: 361 IHRDDLV 367 Lambda K H 0.318 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 385 Number of extensions: 21 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 367 Length of database: 370 Length adjustment: 30 Effective length of query: 337 Effective length of database: 340 Effective search space: 114580 Effective search space used: 114580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate WP_011386430.1 AMB_RS20630 (glutamate 5-kinase)
to HMM TIGR01027 (proB: glutamate 5-kinase (EC 2.7.2.11))
../bin/blast/fastacmd -i /tmp/list.18709.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.18709.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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