Align 3-oxoadipate enol-lactonase (EC 3.1.1.24) (characterized)
to candidate BPHYT_RS21430 BPHYT_RS21430 3-oxoadipate enol-lactonase
Query= BRENDA::Q13KT2 (263 letters) >FitnessBrowser__BFirm:BPHYT_RS21430 Length = 263 Score = 501 bits (1291), Expect = e-147 Identities = 246/263 (93%), Positives = 256/263 (97%) Query: 1 MPYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGH 60 MPYAAVNGTELHYRIDG+RHGNAPWIVLSNSLGTDLSMWA QVAALSKHFRVLRYDTRGH Sbjct: 1 MPYAAVNGTELHYRIDGDRHGNAPWIVLSNSLGTDLSMWASQVAALSKHFRVLRYDTRGH 60 Query: 61 GHSEAPKGPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALC 120 GHSEAPKGPYTIEQLTGDVLGLMDTLKIARANFCG+SMGGLTGVALAARH +R ERV LC Sbjct: 61 GHSEAPKGPYTIEQLTGDVLGLMDTLKIARANFCGISMGGLTGVALAARHGNRFERVVLC 120 Query: 121 NTAARIGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDK 180 NTAARIGSPEVWVPRA KAR+EGM ALADAVLPRWFTADY+EREPVVLA+IRDVFVHTDK Sbjct: 121 NTAARIGSPEVWVPRAAKARSEGMLALADAVLPRWFTADYIEREPVVLALIRDVFVHTDK 180 Query: 181 EGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGARYVELDAS 240 EGYASNC+AIDAADLRPEAPGIK+PALVISGTHDLAATPAQGRELAQ+I GARYVELDAS Sbjct: 181 EGYASNCDAIDAADLRPEAPGIKLPALVISGTHDLAATPAQGRELAQSIPGARYVELDAS 240 Query: 241 HISNIERADAFTKTVVDFLTEQK 263 HISNIE+ADAFTKTVVDFLTEQK Sbjct: 241 HISNIEKADAFTKTVVDFLTEQK 263 Lambda K H 0.320 0.134 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 364 Number of extensions: 10 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 263 Length of database: 263 Length adjustment: 25 Effective length of query: 238 Effective length of database: 238 Effective search space: 56644 Effective search space used: 56644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 47 (22.7 bits)
Align candidate BPHYT_RS21430 BPHYT_RS21430 (3-oxoadipate enol-lactonase)
to HMM TIGR02427 (pcaD: 3-oxoadipate enol-lactonase (EC 3.1.1.24))
../bin/blast/fastacmd -i /tmp/list.26163.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.26163.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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