Align hydroxyacylglutathione hydrolase (EC 3.1.2.6) (characterized)
to candidate H281DRAFT_04399 H281DRAFT_04399 hydroxyacylglutathione hydrolase
Query= BRENDA::Q8ZRM2 (251 letters) >FitnessBrowser__Burk376:H281DRAFT_04399 Length = 263 Score = 205 bits (522), Expect = 7e-58 Identities = 113/256 (44%), Positives = 151/256 (58%), Gaps = 12/256 (4%) Query: 6 IPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKEL 65 +PAF+DNYIWV++ D V+VDPGEAAPV +A W AI LTHHH DHVGGV +L Sbjct: 9 VPAFEDNYIWVVS-DGYHAVVVDPGEAAPVRAYLARRGWRLSAILLTHHHQDHVGGVADL 67 Query: 66 LQHFPQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL--FATPGHTLGHVCYFSR--- 120 L + VYGPA TH + GD + + L PGHT GH+ YF Sbjct: 68 LNG-QAVPVYGPAGEAIGHLTHRLKHGDRVTIAAPALDLSVLEVPGHTSGHIAYFQAADP 126 Query: 121 ---PYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTLICCAHEYTLANIKFALS 177 P++FCGDTLF+ GCGRLFEGTPSQM SL + +LP T + CAHEYTL+NI+FAL+ Sbjct: 127 GGTPHVFCGDTLFACGCGRLFEGTPSQMLASLDSLAALPGATEVHCAHEYTLSNIRFALA 186 Query: 178 ILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQP 237 P + + + K +LR +K TLP + +ER +N FLR ++ + + ++ P Sbjct: 187 CDPDNDELLAWRDKASDLRARKVPTLPTTIAHERAVNPFLRADNPAIQTTLREQLHADVP 246 Query: 238 E--ARFAWLRSKKDTF 251 + A F +R K+ F Sbjct: 247 DRLASFTLMREWKNRF 262 Lambda K H 0.323 0.140 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 249 Number of extensions: 15 Number of successful extensions: 5 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 251 Length of database: 263 Length adjustment: 24 Effective length of query: 227 Effective length of database: 239 Effective search space: 54253 Effective search space used: 54253 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 47 (22.7 bits)
Align candidate H281DRAFT_04399 H281DRAFT_04399 (hydroxyacylglutathione hydrolase)
to HMM TIGR03413 (gloB: hydroxyacylglutathione hydrolase (EC 3.1.2.6))
../bin/blast/fastacmd -i /tmp/list.24074.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.24074.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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