Align N-acetylglucosamine 6-phosphate deacetylase (NagA;b0677) (EC 3.5.1.25) (characterized)
to candidate BWI76_RS08210 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase
Query= CAZy::AAC73771.1 (382 letters) >FitnessBrowser__Koxy:BWI76_RS08210 Length = 382 Score = 679 bits (1752), Expect = 0.0 Identities = 331/382 (86%), Positives = 360/382 (94%) Query: 1 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQL 60 MYALTQGRI+TGHE LDDHA+VIA+GLI+ +CP ELP IEQRS+NGAIL+PGFIDVQL Sbjct: 1 MYALTQGRIYTGHEILDDHAIVIANGLIERICPQTELPTGIEQRSVNGAILAPGFIDVQL 60 Query: 61 NGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAK 120 NGCGGVQFNDTA+AV+VETLEIMQKANE+SGCT+YLPTLIT SD+LMKQGVRVMREYL K Sbjct: 61 NGCGGVQFNDTADAVTVETLEIMQKANERSGCTSYLPTLITASDDLMKQGVRVMREYLQK 120 Query: 121 HPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEV 180 HPNQALGLHLEGPWLN+VKKGTHNP++VRKPDAALVDFLCENADVITK+TLAPE V +V Sbjct: 121 HPNQALGLHLEGPWLNIVKKGTHNPDYVRKPDAALVDFLCENADVITKITLAPERVEPDV 180 Query: 181 ISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEAD 240 I KL AGI+VSAGHSNATLKEAK GFRAGITFATHL+NAMPYITGREPGLAGAI DE D Sbjct: 181 IRKLVAAGIIVSAGHSNATLKEAKIGFRAGITFATHLFNAMPYITGREPGLAGAIFDEPD 240 Query: 241 IYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCV 300 +YCGII DG+HVDYAN+R AKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCV Sbjct: 241 VYCGIIVDGMHVDYANVRLAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCV 300 Query: 301 DENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANL 360 DENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYP+RAIGV+K+LG++A G VANL Sbjct: 301 DENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPSRAIGVDKQLGSIAPGMVANL 360 Query: 361 TAFTPDFKITKTIVNGNEVVTQ 382 TAFT D+KITKTIVNGNEVVT+ Sbjct: 361 TAFTRDYKITKTIVNGNEVVTE 382 Lambda K H 0.319 0.136 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 617 Number of extensions: 9 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 382 Length of database: 382 Length adjustment: 30 Effective length of query: 352 Effective length of database: 352 Effective search space: 123904 Effective search space used: 123904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.9 bits)
Align candidate BWI76_RS08210 BWI76_RS08210 (N-acetylglucosamine-6-phosphate deacetylase)
to HMM TIGR00221 (nagA: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25))
../bin/blast/fastacmd -i /tmp/list.14170.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.14170.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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