Align Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 (characterized)
to candidate BWI76_RS11675 BWI76_RS11675 arginine N-succinyltransferase
Query= SwissProt::P0AE37 (344 letters) >FitnessBrowser__Koxy:BWI76_RS11675 Length = 344 Score = 586 bits (1511), Expect = e-172 Identities = 280/342 (81%), Positives = 312/342 (91%) Query: 1 MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAIKTWQGELPKSEQGYVF 60 MMVIRPVE+ D+ L+ LA +TGGGLTSLPA+EATL+ARIER+ TW+GELPKSEQGYVF Sbjct: 1 MMVIRPVEKGDLPGLLTLAGETGGGLTSLPADEATLAARIERSQMTWRGELPKSEQGYVF 60 Query: 61 VLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSS 120 VLED +G VAGICAIEVAVGLNDPWYNYRVGT VHASKELNVYNALPTLFLSNDHTGSS Sbjct: 61 VLEDCASGAVAGICAIEVAVGLNDPWYNYRVGTQVHASKELNVYNALPTLFLSNDHTGSS 120 Query: 121 ELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLG 180 ELCTLFLDP WRKEGNGYLLSKSRF+FMAAFR++FN+KVVAEMRGVIDEHGYSPFW+SLG Sbjct: 121 ELCTLFLDPKWRKEGNGYLLSKSRFLFMAAFRERFNEKVVAEMRGVIDEHGYSPFWESLG 180 Query: 181 KRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLSQEAQDVIGQVHPQTAPARAVLE 240 KRFF+M+FSRAD+LCGTGQKAFIA LMPKHP+Y FLS EA+ VIG+VHPQTAPARAVLE Sbjct: 181 KRFFAMEFSRADYLCGTGQKAFIAALMPKHPLYIDFLSDEARAVIGEVHPQTAPARAVLE 240 Query: 241 KEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVEVAEGQPAQGDFPACLVANENYHHF 300 KEGFRY NY+DIFDGGPTLEC+IDRVRAIRKSRLV VAEGQP QG++PACLVANE Y F Sbjct: 241 KEGFRYLNYVDIFDGGPTLECEIDRVRAIRKSRLVTVAEGQPVQGEWPACLVANEQYQQF 300 Query: 301 RVVLVRTDPATERLILTAAQLDALKCHAGDRVRLVRLCAEEK 342 R +LV DP ++RL+L+A +LDALKCH GD++RLVRLC EEK Sbjct: 301 RAMLVHADPESDRLVLSARELDALKCHPGDQIRLVRLCPEEK 342 Lambda K H 0.321 0.136 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 504 Number of extensions: 6 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 344 Length of database: 344 Length adjustment: 29 Effective length of query: 315 Effective length of database: 315 Effective search space: 99225 Effective search space used: 99225 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 49 (23.5 bits)
Align candidate BWI76_RS11675 BWI76_RS11675 (arginine N-succinyltransferase)
to HMM TIGR03244 (astA: arginine N-succinyltransferase (EC 2.3.1.109))
../bin/blast/fastacmd -i /tmp/list.12129.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.12129.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.