Align Formiminoglutamase (EC 3.5.3.8) (characterized)
to candidate BWI76_RS08725 BWI76_RS08725 formimidoylglutamase
Query= reanno::Koxy:BWI76_RS08725 (318 letters) >FitnessBrowser__Koxy:BWI76_RS08725 Length = 318 Score = 633 bits (1633), Expect = 0.0 Identities = 318/318 (100%), Positives = 318/318 (100%) Query: 1 MKLWQPTPAALWQGRDDSAEAANALRLFQTIVRAERFEPEMLAGDIALLGFACDEGVRRN 60 MKLWQPTPAALWQGRDDSAEAANALRLFQTIVRAERFEPEMLAGDIALLGFACDEGVRRN Sbjct: 1 MKLWQPTPAALWQGRDDSAEAANALRLFQTIVRAERFEPEMLAGDIALLGFACDEGVRRN 60 Query: 61 KGRTGAERGPETLRRALANMASHDGHDRCVDMGTIHVADDALEAAQQALREAVTACQRAG 120 KGRTGAERGPETLRRALANMASHDGHDRCVDMGTIHVADDALEAAQQALREAVTACQRAG Sbjct: 61 KGRTGAERGPETLRRALANMASHDGHDRCVDMGTIHVADDALEAAQQALREAVTACQRAG 120 Query: 121 KRTLVLGGGHETAFGHGAGVLDAFPGEEVGIINLDAHLDLRIADRASSGTPFRQLALACE 180 KRTLVLGGGHETAFGHGAGVLDAFPGEEVGIINLDAHLDLRIADRASSGTPFRQLALACE Sbjct: 121 KRTLVLGGGHETAFGHGAGVLDAFPGEEVGIINLDAHLDLRIADRASSGTPFRQLALACE 180 Query: 181 AQRRAFHYACIGVSRAANTQALLDEAARRGVTIIEDLDVLNAFEARAIPELARNIARYDR 240 AQRRAFHYACIGVSRAANTQALLDEAARRGVTIIEDLDVLNAFEARAIPELARNIARYDR Sbjct: 181 AQRRAFHYACIGVSRAANTQALLDEAARRGVTIIEDLDVLNAFEARAIPELARNIARYDR 240 Query: 241 LYLTIDLDVLPAREMPAVSAPAALGIPLATLLRIVEPLCRSGKLQAVDLVEFNPQYDIDS 300 LYLTIDLDVLPAREMPAVSAPAALGIPLATLLRIVEPLCRSGKLQAVDLVEFNPQYDIDS Sbjct: 241 LYLTIDLDVLPAREMPAVSAPAALGIPLATLLRIVEPLCRSGKLQAVDLVEFNPQYDIDS 300 Query: 301 QGARAAARLAWQIAHWWQ 318 QGARAAARLAWQIAHWWQ Sbjct: 301 QGARAAARLAWQIAHWWQ 318 Lambda K H 0.322 0.135 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 512 Number of extensions: 12 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 318 Length of database: 318 Length adjustment: 27 Effective length of query: 291 Effective length of database: 291 Effective search space: 84681 Effective search space used: 84681 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 48 (23.1 bits)
Align candidate BWI76_RS08725 BWI76_RS08725 (formimidoylglutamase)
to HMM TIGR01227 (hutG: formimidoylglutamase (EC 3.5.3.8))
../bin/blast/fastacmd -i /tmp/list.7476.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.7476.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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