Align phosphate acetyltransferase (EC 2.3.1.8) (characterized)
to candidate 5209946 Shew_2394 phosphate acetyltransferase (RefSeq)
Query= BRENDA::P0A9M8 (714 letters) >FitnessBrowser__PV4:5209946 Length = 712 Score = 966 bits (2496), Expect = 0.0 Identities = 479/712 (67%), Positives = 590/712 (82%), Gaps = 1/712 (0%) Query: 1 MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRAN 60 MSR IMLIP GT VGLTS+SLG++RA+ER GV++ FKPIAQ R P+++TTI+ + Sbjct: 1 MSRNIMLIPNGTGVGLTSISLGMVRALERHGVKVRFFKPIAQQRPTDKGPERSTTIL-SK 59 Query: 61 SSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDAEVVLVEGLVPTRKHQFAQ 120 S T EP M++ E L+ ++Q DVLME+I+A +E ++VEGLV TR H F+ Sbjct: 60 SPTVNPLEPFDMAHAEHLIRTDQTDVLMEQIIARATECADPSETLIVEGLVQTRNHPFSD 119 Query: 121 SLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFGGAKNTNITGVIVNKLNAPVD 180 +NYEIAK L+A+I+FV + G +TP L R+E+ N++GG+KN + G I+NK+ APVD Sbjct: 120 DINYEIAKALDADIIFVAAPGNETPTALMNRLEIAHNAWGGSKNKRLIGAIINKIGAPVD 179 Query: 181 EQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLN 240 ++GR RPDLSE+FD + + +L S L +LG+VP++ +L+A RA D+A+HL+ Sbjct: 180 DEGRARPDLSEVFDHQDVQRPDAASMFQLPGKSKLRILGSVPYNLNLVAPRASDLAKHLS 239 Query: 241 ATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEI 300 A IIN G++NTRR++ VTFCARSIP+M+ H + SLLVTS DR DV+V+ACLAAMNGV++ Sbjct: 240 ARIINAGEMNTRRLRKVTFCARSIPNMVTHIKTDSLLVTSGDRSDVIVSACLAAMNGVKV 299 Query: 301 GALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEK 360 GALLLTG YE + I LCE+AF TGLPVF+++TNTWQTSL++Q F+ EVPVDD RIE+ Sbjct: 300 GALLLTGSYEPEPEIMALCEQAFETGLPVFLIDTNTWQTSLNIQRFDHEVPVDDAVRIEE 359 Query: 361 VQEYVANYINADWIESLTATSERSRRLSPPAFRYQLTELARKAGKRIVLPEGDEPRTVKA 420 VQEYVA++I+ W+ES+T S R RLSPPAFRY+LTELAR A K +VLPEGDEPRT++A Sbjct: 360 VQEYVASHIDQSWVESVTMNSPREHRLSPPAFRYKLTELARAAAKTVVLPEGDEPRTIEA 419 Query: 421 AAICAERGIATCVLLGNPAEINRVAASQGVELGAGIEIVDPEVVRESYVGRLVELRKNKG 480 AAICAERGIA CVL+GNP EI R+A+ QGV LG G+EI++PE RE YV +VELR++KG Sbjct: 420 AAICAERGIARCVLIGNPEEIQRIASQQGVTLGEGVEIIEPETARERYVAPMVELRRHKG 479 Query: 481 MTETVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSV 540 MTE VAREQLEDN+VLGT+ML Q EVDG+VSGAV+TTANTIRPPLQLIKTAPGSSLVSS+ Sbjct: 480 MTEVVAREQLEDNMVLGTMMLAQGEVDGIVSGAVNTTANTIRPPLQLIKTAPGSSLVSSI 539 Query: 541 FFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGS 600 FFML+P+QV VYGDCAINPDP AEQLA+IAIQSADSAAAFGIEP+VAM+SYSTG+SG GS Sbjct: 540 FFMLMPDQVLVYGDCAINPDPNAEQLADIAIQSADSAAAFGIEPKVAMISYSTGSSGTGS 599 Query: 601 DVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTG 660 DV+KVREATR+A+EKRP+L+IDGPLQYDAAVM +VA+SKAPNSPVAG+ATVF+FPDLNTG Sbjct: 600 DVDKVREATRIAKEKRPELVIDGPLQYDAAVMPNVAQSKAPNSPVAGQATVFVFPDLNTG 659 Query: 661 NTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSAQ 712 NTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQ++Q Sbjct: 660 NTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQASQ 711 Lambda K H 0.316 0.131 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 1362 Number of extensions: 41 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 714 Length of database: 712 Length adjustment: 39 Effective length of query: 675 Effective length of database: 673 Effective search space: 454275 Effective search space used: 454275 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 55 (25.8 bits)
Align candidate 5209946 Shew_2394 (phosphate acetyltransferase (RefSeq))
to HMM TIGR00651 (pta: phosphate acetyltransferase (EC 2.3.1.8))
../bin/blast/fastacmd -i /tmp/list.16756.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.16756.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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