Align phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) (characterized)
to candidate CA265_RS09805 CA265_RS09805 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Query= BRENDA::P80859 (469 letters) >FitnessBrowser__Pedo557:CA265_RS09805 Length = 471 Score = 447 bits (1149), Expect = e-130 Identities = 221/467 (47%), Positives = 314/467 (67%), Gaps = 5/467 (1%) Query: 3 KQQIGVIGLAVMGKNLALNIESRGFSVSVYNRSSSKTEEFLQEAKGKNVVGTYSIEEFVQ 62 K ++G+IGL MG+NL LN+ +GFSV+ Y++ + +E K N+ G IE F+ Sbjct: 8 KYKLGMIGLGTMGRNLLLNMADKGFSVTGYDKDRKMISKLEEEGKKHNLEGFDDIESFIS 67 Query: 63 SLETPRKILLMVKAGTATDATIQSLLPHLEKDDILIDGGNTYYKDTQRRNKELAESGIHF 122 SL+T R ++L+V AG D+ I L P L K DI+ID GN+++ DT RR EL + G+HF Sbjct: 68 SLQTSRTLILLVPAGPIVDSVIAELKPLLSKGDIIIDSGNSHFTDTNRRVDELEKDGLHF 127 Query: 123 IGTGVSGGEEGALKGPSIMPGGQKEAHELVKPILEAISAKVDGEPCTTYIGPDGAGHYVK 182 G G+SGGEEGA GPS+MPGG K+A+ +VK + +A++AKV +PC TYIGP +GH+VK Sbjct: 128 FGMGISGGEEGARFGPSMMPGGDKQAYNVVKDVFDAVAAKVGTDPCVTYIGPGASGHFVK 187 Query: 183 MVHNGIEYGDMQLISESYFILKQVLGLSADELHEVFAEWNKGELDSYLIEITADIFTKKD 242 MVHNGIEY M+LI+E Y ILK LG S +E+++VF +WN+G L S+L+EITA+IF KD Sbjct: 188 MVHNGIEYAIMELIAEVYGILKNGLGYSNNEIYQVFKKWNEGRLQSFLLEITAEIFLFKD 247 Query: 243 EETGKPLVDVILDKAGQKGTGKWTSQSALDLGVPLPIITESVFARFISAMKEERVKASGL 302 ET L+D I D+A KGTGKWTS+ +++L +P+P I E+V R +S K+ RV Sbjct: 248 TETQNDLLDQIKDEARSKGTGKWTSEVSMELQLPVPTINEAVSNRDLSKFKKLRVSLEEA 307 Query: 303 LSGPEVKPVTENKEELIEAVRKALFMSKICSYAQGFAQMKAASEEYNWDLKYGEIAMIFR 362 + K ++ + A + S I +YAQG + AS+EY +DL+ EIA I+R Sbjct: 308 FGKKDTKIAV-----TVDELEDAFYFSMISAYAQGMHLLVQASKEYQYDLQLQEIAKIWR 362 Query: 363 GGCIIRAAFLQKIKEAYDREPELDNLLLDSYFKNIVESYQGALRQVISLAVAQGVPVPSF 422 GGCIIRA FL+ I +AYD+ L++L D+ +NI++ R+ IS + G+ +P+F Sbjct: 363 GGCIIRAKFLEDIYQAYDKNNALEHLFGDAGIQNIIKGTLPGTRKTISACINSGLGIPAF 422 Query: 423 SSALAYYDSYRTAVLPANLIQAQRDYFGAHTYERTDKEGIFHTEWMK 469 +S L Y+D+ TA +P+NLIQAQRD+FGAHT+ER DK+G+FH +W K Sbjct: 423 ASTLTYFDTITTARMPSNLIQAQRDFFGAHTFERIDKDGVFHADWNK 469 Lambda K H 0.315 0.134 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 577 Number of extensions: 29 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 469 Length of database: 471 Length adjustment: 33 Effective length of query: 436 Effective length of database: 438 Effective search space: 190968 Effective search space used: 190968 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 51 (24.3 bits)
Align candidate CA265_RS09805 CA265_RS09805 (phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating))
to HMM TIGR00873 (gnd: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44))
../bin/blast/fastacmd -i /tmp/list.10131.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.10131.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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