Align phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) (characterized)
to candidate 6937550 Sama_1706 phosphoglucomutase (RefSeq)
Query= BRENDA::A0A0H3NJ17 (546 letters) >FitnessBrowser__SB2B:6937550 Length = 560 Score = 648 bits (1671), Expect = 0.0 Identities = 322/549 (58%), Positives = 401/549 (73%), Gaps = 5/549 (0%) Query: 1 MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAGRHSFNEPH 60 MAIH+RAG+ AQQ DL+N+ +L + YY L P+A + V FGTSGHRG A SFNE H Sbjct: 1 MAIHDRAGKQAQQGDLVNIPKLMSHYYRLLPDASDPAQKVSFGTSGHRGCAFHRSFNEQH 60 Query: 61 ILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPT 120 ILAIAQA+ + R + ITGP Y+G DTHALS+ A++SV+EVL AN V V+ Q ++ +TPT Sbjct: 61 ILAIAQAVVDWRTQADITGPLYLGMDTHALSQAAYLSVIEVLIANKVQVLAQRDDAYTPT 120 Query: 121 PAVSNAILVHNK----KGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDR 176 P VS AI+ N+ + L+DGI+ITPSHNPP+DGGIKYNPP+GGPA+ ++T +E R Sbjct: 121 PVVSQAIVAANRHQTGEDALLSDGIIITPSHNPPQDGGIKYNPPHGGPAEGDITSWIETR 180 Query: 177 ANALLAGGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADIVDMAAIQKAGLTLGVDPL 236 AN LA GL GV+R++ A +K VDL+ P+V+ LA+++DMAAI KAG+ +GVDPL Sbjct: 181 ANHYLAHGLDGVRRVNYGIASGLSLLKHVDLISPYVQSLAEVIDMAAIAKAGVRMGVDPL 240 Query: 237 GGSGIEYWKRIAEHYKLNLTLVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDK 296 GGSGI YW+ IAEHY LN+ +VN +D TF FM LDKDG IRMDCSS AMAGLL +D+ Sbjct: 241 GGSGIHYWQPIAEHYGLNIEVVNQAIDPTFDFMPLDKDGKIRMDCSSPYAMAGLLVHKDE 300 Query: 297 FDLAFANDPDYDRHGIVTP-AGLMNPNHYLAVAINYLFQHRPLWGKDVAVGKTLVSSAMI 355 FD+ NDPDYDRHGIV P +GLM+PNHYLAVAI+YL HRP W K +AVGKTLVSSA+I Sbjct: 301 FDICVGNDPDYDRHGIVCPGSGLMDPNHYLAVAIDYLLGHRPNWAKTLAVGKTLVSSALI 360 Query: 356 DRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMC 415 D+V G L+EVPVGFKWFVDGL D S FGGEESAGA+FL+ DG+ W TDKDG I+ Sbjct: 361 DKVCMAHGVPLMEVPVGFKWFVDGLADSSVCFGGEESAGAAFLKMDGSTWCTDKDGFILA 420 Query: 416 LLAAEITAVTGKNPQEHYNELAARFGAPSYNRLQASATSAQKAALSKLSPEMVSASTLAG 475 LLAAEI AVTGK P E Y EL A G Y R+ + KA L+ + + A+++AG Sbjct: 421 LLAAEILAVTGKTPAERYEELVAEHGRSFYKRIDSPLNPKMKAKFGALNAQTLGATSVAG 480 Query: 476 DPITARLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEA 535 D ITA LT APGNGA+IGG+KV TD GWFAARPSGTE +K+Y ESF+ E H ++ +A Sbjct: 481 DAITAVLTKAPGNGAAIGGIKVCTDKGWFAARPSGTEPLFKLYAESFVSEAHLGELISDA 540 Query: 536 VEIVSEVLK 544 ++ LK Sbjct: 541 QSLLGTALK 549 Lambda K H 0.316 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 913 Number of extensions: 31 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 546 Length of database: 560 Length adjustment: 36 Effective length of query: 510 Effective length of database: 524 Effective search space: 267240 Effective search space used: 267240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 53 (25.0 bits)
Align candidate 6937550 Sama_1706 (phosphoglucomutase (RefSeq))
to HMM TIGR01132 (pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2))
../bin/blast/fastacmd -i /tmp/list.9697.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.9697.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.