Align phosphate acetyltransferase (EC 2.3.1.8) (characterized)
to candidate SM_b21532 SM_b21532 phosphate acetyltransferase
Query= BRENDA::Q5LMK3 (337 letters) >FitnessBrowser__Smeli:SM_b21532 Length = 330 Score = 328 bits (842), Expect = 9e-95 Identities = 184/327 (56%), Positives = 215/327 (65%) Query: 6 PIDLLLSDPPARRATVALSEGSDPRVVAGALAAHSAGIADVILVGQAAEIRAALKAQGAP 65 P+D ++ V L EG DPR+VAGA+ A G+A + LVG I L A A Sbjct: 3 PLDRIIDAARKAPRHVVLPEGEDPRIVAGAVQARREGLAAITLVGNREVITQRLAALDAI 62 Query: 66 ADSLTIHDPDSSPLTAEFAAAYYGLRRHKGVSEAAALAAVRTPLVYAAMLVRGDHAVGTV 125 I DP SPLT +FA AY RR KGV AAA AAV +PL +AAM+VR A GTV Sbjct: 63 PQEFRIEDPACSPLTDDFATAYLERRRSKGVDAAAARAAVLSPLTFAAMMVREGIADGTV 122 Query: 126 GGAVATTSDVVRTAIQVIGAAPGAAMVSSFFLMYPPEAATAHARAMLYSDSGLVIDPSVA 185 GGAVATT+D VR A+QVIG APG +VSSFFLM E A A +++D GLV+DP A Sbjct: 123 GGAVATTADTVRAALQVIGRAPGVGLVSSFFLMMLCEPHHARKGAFVFADCGLVVDPDAA 182 Query: 186 ELAAIAAASAASCRALLRAEPKIAMLSFSTKGSARHPHVSKVTDALARLRADHPDLDADG 245 LA IA SA S L K+AMLSFST GSA H VSKV +A R PDL DG Sbjct: 183 GLADIARMSAKSYEMLAGERAKVAMLSFSTGGSAAHERVSKVVEATGMARRAEPDLIIDG 242 Query: 246 ELQFDAAFVPSVGASKAPGSDVAGQANVMIFPNLDAGNIGYKITQRLGGYTAIGPVLQGL 305 ELQFD+AFV +V +KAP S + G+ANV +FPNLDA NIGYKI QR+GG TAIGP+LQGL Sbjct: 243 ELQFDSAFVEAVCLTKAPHSALRGEANVFVFPNLDAANIGYKIAQRIGGATAIGPILQGL 302 Query: 306 AKPANDLSRGCVAGDVTQMIAVTVLQA 332 ++PANDLSRGC A DV MIAVTV+QA Sbjct: 303 SRPANDLSRGCTAADVFHMIAVTVVQA 329 Lambda K H 0.317 0.130 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 285 Number of extensions: 5 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 337 Length of database: 330 Length adjustment: 28 Effective length of query: 309 Effective length of database: 302 Effective search space: 93318 Effective search space used: 93318 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate SM_b21532 SM_b21532 (phosphate acetyltransferase)
to HMM TIGR00651 (pta: phosphate acetyltransferase (EC 2.3.1.8))
../bin/blast/fastacmd -i /tmp/list.17864.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.17864.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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