Align Hydroxyacylglutathione hydrolase cytoplasmic; Glyoxalase II; Glx II; EC 3.1.2.6 (characterized)
to candidate Synpcc7942_1403 Synpcc7942_1403 Hydroxyacylglutathione hydrolase
Query= SwissProt::O24496 (258 letters) >FitnessBrowser__SynE:Synpcc7942_1403 Length = 258 Score = 209 bits (531), Expect = 6e-59 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 14/264 (5%) Query: 1 MKIFHVPCLQDNYSYLIIDESTGDAAVVDPVDPEKVIASAEKHQAKIKFVLTTHHHWDHA 60 M+I +P LQDNY +L++D AAVVDP + E V+A+ + + +L THHH DH Sbjct: 1 MRIDCLPALQDNYIFLLVDVEQRQAAVVDPAEAEPVLAALQAEGLTLTAILNTHHHGDHV 60 Query: 61 GGNEKIKQLVPDIKVYGGSLDK--VKGCTDAVDNGDKLTL-GQDINILALHTPCHTKGHI 117 GGN ++ + P+ V ++D+ + G T ++ GD+L + GQ +L + P HT+GHI Sbjct: 61 GGNRRLLRQFPEAAVSASAVDRDRIPGQTVLLEAGDRLQICGQTAEVLFV--PGHTRGHI 118 Query: 118 SYYVNGKEGENP--AVFTGDTLFVAGCGKFFEGTAEQMYQSLCVTLAALPKPTQVYCGHE 175 +YY NP A+F GDTLF GCG+ FEGT QM SL L +LP T +YC HE Sbjct: 119 AYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSL-QQLRSLPDDTAIYCAHE 177 Query: 176 YTVKNLEFALTVEPNNGKIQQK---LAWARQQRQADLPTIPSTLEEELETNPFMRVDKPE 232 YT+ NL FALTVEP+N +QQ+ +A ARQQ QA TIPS L+ E TNPF+R D+ Sbjct: 178 YTLNNLRFALTVEPDNFDLQQRYQAVAIARQQGQA---TIPSRLDIEKATNPFLRWDQAA 234 Query: 233 IQEKLGCKSPIDTMREVRNKKDQW 256 +Q + + P+ T+ +R++KDQ+ Sbjct: 235 LQAAVSSQDPVQTLARLRSRKDQF 258 Lambda K H 0.317 0.135 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 205 Number of extensions: 10 Number of successful extensions: 4 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 258 Length of database: 258 Length adjustment: 24 Effective length of query: 234 Effective length of database: 234 Effective search space: 54756 Effective search space used: 54756 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 47 (22.7 bits)
Align candidate Synpcc7942_1403 Synpcc7942_1403 (Hydroxyacylglutathione hydrolase)
to HMM TIGR03413 (gloB: hydroxyacylglutathione hydrolase (EC 3.1.2.6))
../bin/blast/fastacmd -i /tmp/list.14696.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.14696.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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