Align phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) (characterized)
to candidate GFF2629 PS417_13395 phosphoglucomutase
Query= BRENDA::I6Y2G3 (547 letters) >FitnessBrowser__WCS417:GFF2629 Length = 547 Score = 639 bits (1648), Expect = 0.0 Identities = 337/549 (61%), Positives = 399/549 (72%), Gaps = 7/549 (1%) Query: 1 MVANPRAGQPAQPEDLVDLPHLVTAYYSIEPDPDDLAQQVAFGTSGHRGSALTGTFNELH 60 M +P AG+PA + LVD+P LVTAYY+ +PD Q+VAFGTSGHRG++ +FNE H Sbjct: 1 MTISPFAGKPAPAQLLVDIPRLVTAYYTGQPDAAISTQRVAFGTSGHRGNSFELSFNEWH 60 Query: 61 ILAITQAIVEYRAAQGTTGPLFIGRDTHGLSEPAWVSALEVLAANQVVAVVDSRDRYTPT 120 +LAI+QAI YR AQG GPLF+G DTH LS PA SALEVLAAN V ++ D YTPT Sbjct: 61 VLAISQAICLYREAQGINGPLFVGLDTHALSTPAGASALEVLAANGVHVMLAEGDEYTPT 120 Query: 121 PAISHAILTYNRGRTEALADGIVVTPSHNPPSDGGIKYNPPNGGPADTAATTAIAKRANE 180 PAISHAI+ YNRGRT LADGIV+TPSHNPP GG KYNPPNGGPADT T I +ANE Sbjct: 121 PAISHAIICYNRGRTSGLADGIVITPSHNPPQSGGYKYNPPNGGPADTHVTKWIEAKANE 180 Query: 181 ILLAR-SMVKRLPLARALR--TAQRHDYLGHYVDDLPNVVDIAAIREAGVRIGADPLGGA 237 +L + + VKR+ A+AL+ T RHDYL YV DL NV+D+ AIR A +R+G DPLGGA Sbjct: 181 LLAKKLAGVKRITHAQALKADTTHRHDYLNTYVADLVNVIDMDAIRSADLRLGVDPLGGA 240 Query: 238 SVDYWGEIAHRHGLDLTVVNPLVDATWRFMTLDTDGKIRMDCSSPDAMAGLIRTMFGNRE 297 V YW IA + L+L VVN VDAT+RFM +D DG+IRMD SS AM GLI G +E Sbjct: 241 GVRYWSAIAEHYRLNLEVVNTEVDATFRFMCVDWDGQIRMDPSSSYAMQGLI----GLKE 296 Query: 298 RYQIATGNDADADRHGIVTPDEGLLNPNHYLAVAIEYLYTHRPSWPAGIAVGKTVVSSSI 357 R+ +A D D DRHGIVTP GLL PN+YLAV+I+YL+ +RP W A AVGKTVVSS + Sbjct: 297 RFDVAFACDPDHDRHGIVTPSGGLLAPNNYLAVSIDYLFQNRPDWRADAAVGKTVVSSGL 356 Query: 358 IDRVVAGIGRQLVEVPVGFKWFVDGLIGATLGFGGEESAGASFLRRDGSVWTTDKDGIIM 417 IDRV A IGR+L EVPVGFKWF DGL +LGFGGEESAGASFLR+DG+VW+TDKDG+I Sbjct: 357 IDRVAARIGRRLYEVPVGFKWFADGLFDGSLGFGGEESAGASFLRKDGTVWSTDKDGLIP 416 Query: 418 ALLAAEILAVTGATPSQRYHALAGEYGGPCYARIDAPADREQKARLARLSADQVSATELA 477 ALLAAE+ + G PSQ Y L G P R+DA A QKA L +LS DQV++TELA Sbjct: 417 ALLAAEMTSRKGQDPSQIYRGLTDALGEPFAIRVDAKATPAQKALLGKLSPDQVTSTELA 476 Query: 478 GEPITAKLTTAPGNGAALGGLKVTTANAWFAARPSGTEDVYKIYAESFRGPQHLVEVQQT 537 GE I L+ APGN A+GGLKV T N WFAARPSGTED+YKIYAESF G HL ++ + Sbjct: 477 GESIQQILSHAPGNDQAIGGLKVMTENGWFAARPSGTEDIYKIYAESFIGEDHLKQLVEE 536 Query: 538 AREVVDRVI 546 A+ +VD I Sbjct: 537 AQVLVDGAI 545 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 972 Number of extensions: 36 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 547 Length of database: 547 Length adjustment: 36 Effective length of query: 511 Effective length of database: 511 Effective search space: 261121 Effective search space used: 261121 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 52 (24.6 bits)
Align candidate GFF2629 PS417_13395 (phosphoglucomutase)
to HMM TIGR01132 (pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2))
../bin/blast/fastacmd -i /tmp/list.15041.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.15041.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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