Align lactoylglutathione lyase (EC 4.4.1.5) (characterized)
to candidate AZOBR_RS29310 AZOBR_RS29310 glyoxalase I
Query= BRENDA::P0A0T3 (138 letters) >FitnessBrowser__azobra:AZOBR_RS29310 Length = 141 Score = 123 bits (308), Expect = 1e-33 Identities = 60/133 (45%), Positives = 90/133 (67%), Gaps = 7/133 (5%) Query: 1 MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETD-----STVL 55 ++LLH MLRV ++E+SLDFY +LGM++++++++ + +FT A+VGYG D + V+ Sbjct: 6 IKLLHAMLRVSDMERSLDFYTRLLGMRVIQQREHKKNQFTQAYVGYGTAEDPLDSPAMVI 65 Query: 56 ELTHNWDTE-RYDLGNAYGHIAVEVDDAYEA-CERVKRQGGNVVREAGPMKHGTTVIAFV 113 EL NW E Y G+A+GHIA+ V A CER+ +G V R P KHG ++AF+ Sbjct: 66 ELVANWTQEVPYSQGSAFGHIAIGVPSGIGALCERLAAEGVPVPRPPKPQKHGDNIVAFI 125 Query: 114 EDPDGYKIEFIQK 126 EDPDGY+IE +Q+ Sbjct: 126 EDPDGYRIELVQR 138 Lambda K H 0.318 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 87 Number of extensions: 6 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 138 Length of database: 141 Length adjustment: 15 Effective length of query: 123 Effective length of database: 126 Effective search space: 15498 Effective search space used: 15498 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 42 (20.8 bits)
Align candidate AZOBR_RS29310 AZOBR_RS29310 (glyoxalase I)
to HMM TIGR00068 (gloA: lactoylglutathione lyase (EC 4.4.1.5))
../bin/blast/fastacmd -i /tmp/list.31462.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.31462.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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