Align phosphate acetyltransferase (EC 2.3.1.8) (characterized)
to candidate GFF3155 Psest_3214 phosphate acetyltransferase
Query= BRENDA::C1DQG8 (712 letters) >FitnessBrowser__psRCH2:GFF3155 Length = 698 Score = 1134 bits (2933), Expect = 0.0 Identities = 580/695 (83%), Positives = 639/695 (91%), Gaps = 1/695 (0%) Query: 1 MHTLFLAPTGYAVGLNSISLGLIRALEQAGLKVGFFKPIAQPFPIDQGRERSCLLVERTL 60 MHT+FLAPTG+ GLNSISLGLIRALE AGLKVGFFKPIAQPFP+DQGRERSC+LVERTL Sbjct: 1 MHTIFLAPTGFGGGLNSISLGLIRALENAGLKVGFFKPIAQPFPVDQGRERSCILVERTL 60 Query: 61 GRSTPEPILLDQVERHLASGETDLLLEEVVSRYQQAAAGKDVVIVEGMLPTRDSDYSAYL 120 ++PEP+ L+QVER LA GE DLLLE+VVSRYQQ AAGKDVVIVEGM+PTR+S+Y+ + Sbjct: 61 KLTSPEPLPLEQVERQLADGEIDLLLEDVVSRYQQVAAGKDVVIVEGMVPTRESNYTQRI 120 Query: 121 NPLLSKSLNAEVILIAVQGGDGLKQLAERIEIQAQLFGGIKSPKVLGAIINKIDSGDGIP 180 N L+KSL+AEVILIA QG D LK+LAERIEIQAQL+GG K PKVLG I+NK+ + +G+P Sbjct: 121 NTQLAKSLDAEVILIAAQGNDSLKRLAERIEIQAQLYGGAKDPKVLGVILNKVKTEEGLP 180 Query: 181 AFVERLKEYLPSLGSTDFQLFGAIPFAEELNALRTRDVAELIGAQVLSAGEADRRRVSKI 240 AF++ LK++LP LGS DFQL GAIPF+EELNALRTRD+AEL+GAQVL+AGEAD+RRV+KI Sbjct: 181 AFIDSLKQHLPLLGSADFQLLGAIPFSEELNALRTRDIAELLGAQVLNAGEADQRRVNKI 240 Query: 241 VLCARAVPSTVPLLQPGVLVVTPGDRDDVILAASLASLNGVKLAGLLLCSDFMPDPRIME 300 VLCARAVP+TV LLQ GVLVVTPGDRDD+ILAASLASLNG KLAGLLLCSDF PDPRI+E Sbjct: 241 VLCARAVPNTVQLLQSGVLVVTPGDRDDIILAASLASLNGEKLAGLLLCSDFAPDPRILE 300 Query: 301 LCKAALDGGLPVMSVTTGSYDTATNLFALNKETPADDIERATRVTDFIAGHLHPEYLRSR 360 LCKAALDGGLPVM+V T SYDTA NLF LNKETPADDIERATRVTDFIA HLHPE+L +R Sbjct: 301 LCKAALDGGLPVMTVETNSYDTANNLFGLNKETPADDIERATRVTDFIAKHLHPEFLHTR 360 Query: 361 CSLPR-ELLLSPPAFRYQLVKSAQEADKRIVLPEGTEPRTIRAAAICQERGIARCVLLAR 419 CS+PR EL +SP AFRYQLVK AQ+A+KRIVLPEG EPRTIRAAAICQERGIARCVLLA+ Sbjct: 361 CSVPRGELRMSPAAFRYQLVKRAQDANKRIVLPEGNEPRTIRAAAICQERGIARCVLLAK 420 Query: 420 PEEVRAVAREQGITLPDGLEILDPESIRAQYIAPMVKMRQSKGLTPEMADEQLRDTVVLG 479 PEEV+ VAREQGI+LP LEILDP+SI +Y+ PM +MR++KGLTPE A EQL+DTVVLG Sbjct: 421 PEEVQQVAREQGISLPASLEILDPDSIANRYVEPMCEMRKAKGLTPEDAREQLKDTVVLG 480 Query: 480 TMMLALDEVDGLVSGAVHTTANTIRPALQLIKTAPGYNLVSSVFFMLLPDQVLVYGDCAV 539 TMMLALDEVDGLVSGAVHTTANTIRPALQLIKTAPGY+LVSSVFFMLLPDQVLVYGDCAV Sbjct: 481 TMMLALDEVDGLVSGAVHTTANTIRPALQLIKTAPGYSLVSSVFFMLLPDQVLVYGDCAV 540 Query: 540 NPNPSAAELAEIALQSAESAVALGVHPRVAMISYSTGDSGSGAEVDKVREATRIAQERAP 599 NPNPSA ELAEIALQSAESAVALGV+PRVAMISYSTG SGSGAEV+KV EATRIAQERAP Sbjct: 541 NPNPSATELAEIALQSAESAVALGVNPRVAMISYSTGSSGSGAEVEKVAEATRIAQERAP 600 Query: 600 GLPIDGPLQYDAASVASVGKQKAPNSPVAGQATVFVFPDLNTGNTTYKAVQRNANCISVG 659 LPIDGPLQYDAASV SVGKQKAPNS VAGQATVF+FPDLNTGNTTYKAVQRNANC+SVG Sbjct: 601 ALPIDGPLQYDAASVLSVGKQKAPNSKVAGQATVFIFPDLNTGNTTYKAVQRNANCLSVG 660 Query: 660 PMLQGLAKPVNDLSRGALVDDIVFTIALTALQAAS 694 PMLQGLAKPVNDLSRGALVDDIVFTIALTALQAA+ Sbjct: 661 PMLQGLAKPVNDLSRGALVDDIVFTIALTALQAAN 695 Lambda K H 0.318 0.135 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 1522 Number of extensions: 68 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 712 Length of database: 698 Length adjustment: 39 Effective length of query: 673 Effective length of database: 659 Effective search space: 443507 Effective search space used: 443507 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 54 (25.4 bits)
Align candidate GFF3155 Psest_3214 (phosphate acetyltransferase)
to HMM TIGR00651 (pta: phosphate acetyltransferase (EC 2.3.1.8))
../bin/blast/fastacmd -i /tmp/list.25327.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.25327.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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