Align Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) (characterized)
to candidate PfGW456L13_4585 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
Query= reanno::pseudo3_N2E3:AO353_17230 (266 letters) >FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_4585 Length = 263 Score = 462 bits (1188), Expect = e-135 Identities = 228/262 (87%), Positives = 245/262 (93%) Query: 1 VGFVQLADGELKYQLDGPEHAPVLVLSNSLGTNLHMWDVQIPAFTKHFRVLRFDTRGHGR 60 V FVQLA+GEL YQLDGP APVLVLSNSLGT+LHMWD QIPAF+KHFRVLRFDTRGHG+ Sbjct: 1 VAFVQLAEGELHYQLDGPVDAPVLVLSNSLGTDLHMWDAQIPAFSKHFRVLRFDTRGHGQ 60 Query: 61 SLVTPGPYSIEQLGRDVLALLDALNIERAHFCGLSMGGLIGQWLGINAGERLHKLVVCNT 120 SLVTPGPYSIEQLGRDVLALLDAL+IERAHFCGLSMGGLIGQWLGINAG+RL++L+VCNT Sbjct: 61 SLVTPGPYSIEQLGRDVLALLDALHIERAHFCGLSMGGLIGQWLGINAGDRLNQLIVCNT 120 Query: 121 AAKIGDPSVWNPRIETVLRDGPAAMVALRDASIARWFTPDFAQANPAVAKQITDMLAATS 180 AAKIGDPSVWNPRIE VLRDG AAMVALRDASIARWFTPDF++ANPA AKQITDMLAATS Sbjct: 121 AAKIGDPSVWNPRIEMVLRDGQAAMVALRDASIARWFTPDFSEANPAAAKQITDMLAATS 180 Query: 181 PQGYAANCAAVRDADFREQLASITVPTLVIAGTEDAVTPPSGGRFIQERVRGAEYAEFYA 240 P+GYAANCAAVRDADFR+QL+SI P LVIAGTEDAVTPPSGG FIQE V GAEYAEFYA Sbjct: 181 PEGYAANCAAVRDADFRDQLSSIKAPLLVIAGTEDAVTPPSGGHFIQEHVPGAEYAEFYA 240 Query: 241 AHLSNVQAGSAFSDRVLSFLLA 262 AHLSNVQAG+ FS+ VL+FL A Sbjct: 241 AHLSNVQAGADFSECVLAFLKA 262 Lambda K H 0.321 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 370 Number of extensions: 8 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 266 Length of database: 263 Length adjustment: 25 Effective length of query: 241 Effective length of database: 238 Effective search space: 57358 Effective search space used: 57358 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 47 (22.7 bits)
Align candidate PfGW456L13_4585 (Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24))
to HMM TIGR02427 (pcaD: 3-oxoadipate enol-lactonase (EC 3.1.1.24))
../bin/blast/fastacmd -i /tmp/list.845.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.845.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.