Align Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 (characterized)
to candidate Pf1N1B4_1055 Phosphate acetyltransferase (EC 2.3.1.8)
Query= SwissProt::P77844 (329 letters) >FitnessBrowser__pseudo1_N1B4:Pf1N1B4_1055 Length = 422 Score = 266 bits (681), Expect = 5e-76 Identities = 143/330 (43%), Positives = 206/330 (62%), Gaps = 5/330 (1%) Query: 1 MSAELFENWLLKRARAEHSHIVLPEGDDDRILMAAHQLLDQDICDITILGDPVKIKERAT 60 +S +F L++RA+A + IVLPEG + + AA + I +L P ++ A Sbjct: 92 LSPAVFRYQLIQRAQAANKRIVLPEGSEPLTVQAAAICQARGIARCVLLAKPADVEAVAR 151 Query: 61 ELGLHLNTAYLVNPLTDPRL--EEFAEQFAELRKSKSVTIDEAREIMKDISYFGTMMVHN 118 G+ L + DP L E + E LRK+KS+ A + ++D GTMM+ Sbjct: 152 AQGIELPPGL---EILDPDLIRERYVEPMVALRKTKSLNAPMAEQQLEDTVVIGTMMLAL 208 Query: 119 GDADGMVSGAANTTAHTIKPSFQIIKTVPEASVVSSIFLMVLRGRLWAFGDCAVNPNPTA 178 + DG+VSG ++TA+TI+P+ Q+IKT P ++VSS+F M+ + +GDC +NP+P+A Sbjct: 209 DEVDGLVSGVIHSTANTIRPALQLIKTAPGCTLVSSVFFMLFPEEVLVYGDCVMNPHPSA 268 Query: 179 EQLGEIAVVSAKTAAQFGIDPRVAILSYSTGNSGGGSDVDRAIDALAEARRLNPELCVDG 238 +L EIA+ SA +AA FGI PRVA++SYS+G S G +V++ +A A L +DG Sbjct: 269 SELAEIALQSADSAAAFGITPRVAMISYSSGESASGEEVEKVREATLLAHEQQNSLLIDG 328 Query: 239 PLQFDAAVDPGVARKKMPDSDVAGQANVFIFPDLEAGNIGYKTAQRTGHALAVGPILQGL 298 PLQ+DAA + VAR+ P+S VAG+A VF+FPDL GN +K QR+ +++GP+LQGL Sbjct: 329 PLQYDAAANETVARQLAPNSQVAGRATVFVFPDLNTGNTTHKAVQRSADCVSLGPMLQGL 388 Query: 299 NKPVNDLSRGATVPDIVNTVAITAIQAGGR 328 KPVNDL RGA V DIV T+A+TAIQA R Sbjct: 389 RKPVNDLPRGAQVDDIVYTIALTAIQAANR 418 Lambda K H 0.318 0.134 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 332 Number of extensions: 9 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 329 Length of database: 422 Length adjustment: 30 Effective length of query: 299 Effective length of database: 392 Effective search space: 117208 Effective search space used: 117208 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate Pf1N1B4_1055 (Phosphate acetyltransferase (EC 2.3.1.8))
to HMM TIGR00651 (pta: phosphate acetyltransferase (EC 2.3.1.8))
../bin/blast/fastacmd -i /tmp/list.19402.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.19402.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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