Align UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (characterized)
to candidate AO353_26975 AO353_26975 UTP--glucose-1-phosphate uridylyltransferase
Query= BRENDA::O25363 (273 letters) >FitnessBrowser__pseudo3_N2E3:AO353_26975 Length = 279 Score = 368 bits (944), Expect = e-107 Identities = 174/266 (65%), Positives = 220/266 (82%) Query: 1 MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKR 60 MIKKCLFPAAGYGTRFLP TK +PKEMLP+V+KPLIQY VEEA++AG ++IVTGR KR Sbjct: 1 MIKKCLFPAAGYGTRFLPATKAMPKEMLPVVNKPLIQYGVEEALDAGLTEISIVTGRGKR 60 Query: 61 SLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIG 120 +LED+FD SYE+E+QI+GT+KE L IR ++++C FSY RQ +MKGLGHAILTG LIG Sbjct: 61 ALEDHFDISYELENQIKGTDKEKYLVGIRKLLDECSFSYTRQTEMKGLGHAILTGRPLIG 120 Query: 121 NEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIRGEWLEE 180 +EPFAV+LADDLC++ D VL QM LY++Y+C+IVAI+EV +E +KYGVI G+ + + Sbjct: 121 DEPFAVVLADDLCVNLDGDGVLTQMVKLYKQYRCTIVAIQEVDPQETNKYGVIAGDLIGD 180 Query: 181 GVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKR 240 +Y +++MVEKP EDAPSNLA+IGRYILTPDIF+++ ET+PGK EIQITDAL QA+ Sbjct: 181 DLYRVRNMVEKPKPEDAPSNLAIIGRYILTPDIFKLIEETEPGKGGEIQITDALMKQAQD 240 Query: 241 KRIIAYQFKGKRYDCGSVEGYIEASN 266 +IAY+FKG R+DCG EGYIEA+N Sbjct: 241 GCVIAYKFKGTRFDCGGAEGYIEATN 266 Lambda K H 0.318 0.136 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 306 Number of extensions: 10 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 273 Length of database: 279 Length adjustment: 25 Effective length of query: 248 Effective length of database: 254 Effective search space: 62992 Effective search space used: 62992 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 47 (22.7 bits)
Align candidate AO353_26975 AO353_26975 (UTP--glucose-1-phosphate uridylyltransferase)
to HMM TIGR01099 (galU: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9))
../bin/blast/fastacmd -i /tmp/list.17985.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.17985.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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