Align Glucokinase (EC 2.7.1.2) (characterized)
to candidate Pf6N2E2_2897 Glucokinase (EC 2.7.1.2)
Query= reanno::WCS417:GFF4431 (318 letters) >FitnessBrowser__pseudo6_N2E2:Pf6N2E2_2897 Length = 319 Score = 552 bits (1422), Expect = e-162 Identities = 267/318 (83%), Positives = 293/318 (92%) Query: 1 MKLALVGDIGGTNARFALWRDQELHSIRVHATADHSSPEDAIKVYLKEEGLEIGDIGAVC 60 +KLALVGDIGGTNARFALW++ L +I+V ATAD++ PEDAI+VYL GL+ G IG+VC Sbjct: 1 LKLALVGDIGGTNARFALWKNHTLENIQVLATADYACPEDAIQVYLSGLGLKQGAIGSVC 60 Query: 61 LSVAGPVSGDEFKFTNNHWRLSKTAFCKTLQVDELLLVNDFSAMALGMTRLKPDEFRVVC 120 LSVAGPVSGDEF+FTNNHWRLS AFC+TLQV++LLLVNDFSAMALGMT L+PDE+RVVC Sbjct: 61 LSVAGPVSGDEFRFTNNHWRLSNLAFCQTLQVEKLLLVNDFSAMALGMTCLRPDEYRVVC 120 Query: 121 EGTPEPLRPAVVIGPGTGLGVGTLLDLGAGRFAALPGEGGHVDLPLSSPRETQLWQHIYT 180 EGTPEPLRPAVVIGPGTGLGVGTLLDLG GRFAALPGEGGHVDLPLSSPRETQLWQHIY Sbjct: 121 EGTPEPLRPAVVIGPGTGLGVGTLLDLGEGRFAALPGEGGHVDLPLSSPRETQLWQHIYN 180 Query: 181 EIGHVSAETALSGGGLPRLYRAICAVDGHTPVLETPEAITAAGLAGDPVAMEVLDQFSIW 240 EIGHVSAETALSG GLPR+YRAICAVDGH PVL+TPE+ITAAGLAGDP+A+EVL+QF W Sbjct: 181 EIGHVSAETALSGSGLPRVYRAICAVDGHVPVLDTPESITAAGLAGDPIALEVLEQFCRW 240 Query: 241 LGRVAGNNVLTTGGRGGVYIVGGVIPRFADFFINSGFAKSFADKGCMSDYFKGIPVWLVT 300 LGRVAGNNVLT GGRGGVYIVGGV+PRFADFF+ SGFA+ FADKGCMSDYFKGIPVWLVT Sbjct: 241 LGRVAGNNVLTLGGRGGVYIVGGVVPRFADFFLESGFARCFADKGCMSDYFKGIPVWLVT 300 Query: 301 APYSGLTGAGVALEQAFA 318 APY GL GAGVALEQ+ A Sbjct: 301 APYPGLMGAGVALEQSAA 318 Lambda K H 0.320 0.139 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 462 Number of extensions: 10 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 318 Length of database: 319 Length adjustment: 27 Effective length of query: 291 Effective length of database: 292 Effective search space: 84972 Effective search space used: 84972 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 48 (23.1 bits)
Align candidate Pf6N2E2_2897 (Glucokinase (EC 2.7.1.2))
to HMM TIGR00749 (glk: glucokinase (EC 2.7.1.2))
../bin/blast/fastacmd -i /tmp/list.27193.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.27193.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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