Align phosphate acetyltransferase (EC 2.3.1.8) (characterized)
to candidate 208543 DVU3029 phosphate acetyltransferase
Query= metacyc::GIO2-991-MONOMER (792 letters) >MicrobesOnline__882:208543 Length = 704 Score = 477 bits (1228), Expect = e-139 Identities = 296/724 (40%), Positives = 426/724 (58%), Gaps = 40/724 (5%) Query: 61 DTLFLSDISLVGQRTPLLLGFFNYFERHLPHVGFFEPIAAEALASSELRIDRHVELVYKV 120 + L+++ ++ ++LG R + V FF PI +A S+++R D + L+ + Sbjct: 3 NNLYITATESKSGKSAVVLGMMQLLLRDVRKVAFFRPIINQA--STDVR-DHDINLILRH 59 Query: 121 FNLKGDVRAMTGVQDAEAARMIANGQHSELLDKIYSQYASYKEGQDLVLVEGPGPLMGGT 180 F L +A +I NGQH+ LLD I +Y ++ D VL EG L Sbjct: 60 FGLDIAYEDTYAYSLQDARELINNGQHATLLDNILKKYKKLEDAYDFVLCEGTDFLGKDA 119 Query: 181 ----ELDAQIAAALNAPVLMTMTGQPNATVADYYNRAMVKRQVFLD----HHVEVLGLVM 232 EL+A IAA L PV++ GQ A + Q+ +D ++V+ V+ Sbjct: 120 AFEFELNADIAANLGCPVMVVANGQQKAA-----RELIASTQLTIDLLDEKGLDVVTAVI 174 Query: 233 NG--LPRQSHAILSGQLRDKFAAAGLPFAGAIPTDIMLRNVRLDEVQTAMGAQRLYGDSL 290 N + + L K + +P + L +++V+ +GAQ LYG Sbjct: 175 NRATVTEAEREEIIKSLECKVNCSNPLAVYVLPEESTLGKPTMNDVKKWLGAQVLYGHGR 234 Query: 291 LTDVEFDDVVVASQRLEELLEILAERPMGRPLVVTSADRLDIVLGLLAAQLSVSGPGVAG 350 L D DD ++A+ ++ L+ +++ LV+T DR DI+L LA++LS + P ++G Sbjct: 235 L-DTLVDDYIIAAMQIGNFLDYVSQGC----LVITPGDRSDIILSSLASRLSTAYPDISG 289 Query: 351 ILLTQAGSARSGRNYARDTIDRIFAGLSSSGLYKGSLLPVLVTDMPLRDAIRKLDNLDAA 410 +LLT G N + R+ G + G +P+L I+ L+ L Sbjct: 290 LLLT--GGLEPAAN-----VHRLIEG------WTGVPIPILSVKDHTYKTIQTLNELYGK 336 Query: 411 ILPSSTRKISQCKRLFEQYVDANAVVARLQNMVRPNRMTPKMFMHTLKSMCNATPQHIVL 470 I P + RKI+ LFE+++D++ + +RL N + +R+TPKMF L IVL Sbjct: 337 IEPDNDRKINTALALFERHIDSSELGSRLINR-KSSRITPKMFEFNLIEKAKRNRMRIVL 395 Query: 471 PESEDKRVLAAAADVVQRGLAKITLLGDPTTILAEAAKLGLDLSGCNIHNPNTSDRFDKY 530 PE ++R+L AA +V+R +A I LLGD T+ + LGLD+ G I PN S +FD+Y Sbjct: 396 PEGAEERILRAADILVRREVADIILLGDANTVGSRIGDLGLDMDGVQIVQPNLSPKFDEY 455 Query: 531 VDMLVEARKKKGMTREVAADTLHGDVNFFATMMIVAGDADGMVSGAVHTTASTVRPALQV 590 V E RKKKG++ E A D ++ D +F TMM+ GDADGMVSGA++TTA T+RPA + Sbjct: 456 VAAYHECRKKKGISMEQARDMMN-DPTYFGTMMVHKGDADGMVSGAINTTAHTIRPAFEF 514 Query: 591 LKS-PDTPLVSSVFIMCLPDRVVVYGDCAVNVNPSAADLAQIAITSNDTAAAFGIEPRVA 649 +K+ P +VSSVF+MCL DRV+V+GDCAVN NP+A LA+IAI+++ TA FG++PRVA Sbjct: 515 IKTKPGVSIVSSVFLMCLKDRVLVFGDCAVNPNPTAEQLAEIAISASHTARIFGVDPRVA 574 Query: 650 MLSYSTLGSGSGPDVQKVSEAVAIVKQRRPDIKVEGPIQYDAAIDPKVAAVKVQGLSEVA 709 MLSYST SG G DV+KV EA I K+R P++ +EGP+QYDAAID VA K+ G S VA Sbjct: 575 MLSYSTGSSGKGADVEKVIEATRIAKERAPELLLEGPLQYDAAIDMDVARTKLPG-STVA 633 Query: 710 GKATVFIFPDLNTGNNTYKAVQQSTGAIAMGPVMQGLLRPVNDLSRGCTVPDIINTICVT 769 G+ATVFIFPDLNTGNNTYKAVQ++ GA+A+GPV+QGL +PVNDLSRGCTV DI+NT+ +T Sbjct: 634 GQATVFIFPDLNTGNNTYKAVQRAAGAVAIGPVLQGLNKPVNDLSRGCTVADIVNTVAIT 693 Query: 770 SIQA 773 +IQA Sbjct: 694 AIQA 697 Lambda K H 0.320 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 1191 Number of extensions: 62 Number of successful extensions: 10 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 792 Length of database: 704 Length adjustment: 40 Effective length of query: 752 Effective length of database: 664 Effective search space: 499328 Effective search space used: 499328 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 55 (25.8 bits)
Align candidate 208543 DVU3029 (phosphate acetyltransferase)
to HMM TIGR00651 (pta: phosphate acetyltransferase (EC 2.3.1.8))
../bin/blast/fastacmd -i /tmp/list.7564.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.7564.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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